SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q66SS1

- Q66SS1_HUMAN

UniProt

Q66SS1 - Q66SS1_HUMAN

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Paired box gene 6 isoform a

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. sequence-specific DNA binding Source: InterPro
  2. sequence-specific DNA binding transcription factor activity Source: InterPro

GO - Biological processi

  1. multicellular organismal development Source: UniProtKB-KW
  2. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Developmental proteinUniRule annotationSAAS annotations

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotations

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotations

Names & Taxonomyi

Protein namesi
Submitted name:
Paired box gene 6 isoform aImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

Nucleus By similarity UniRule annotationSAAS annotations

GO - Cellular componenti

  1. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotationSAAS annotations

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA32960.

PTM / Processingi

Proteomic databases

PRIDEiQ66SS1.

Expressioni

Gene expression databases

ArrayExpressiQ66SS1.

Structurei

3D structure databases

ProteinModelPortaliQ66SS1.
SMRiQ66SS1. Positions 4-136, 211-278.

Family & Domainsi

Sequence similaritiesi

Contains 1 paired domain.UniRule annotation
Contains paired domain.SAAS annotations

Keywords - Domaini

HomeoboxUniRule annotation, Paired boxUniRule annotationSAAS annotations

Phylogenomic databases

HOVERGENiHBG009115.
KOiK08031.
PhylomeDBiQ66SS1.

Family and domain databases

Gene3Di1.10.10.10. 2 hits.
1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
IPR001523. Paired_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00046. Homeobox. 1 hit.
PF00292. PAX. 1 hit.
[Graphical view]
PRINTSiPR00027. PAIREDBOX.
SMARTiSM00389. HOX. 1 hit.
SM00351. PAX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 2 hits.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
PS00034. PAIRED_1. 1 hit.
PS51057. PAIRED_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q66SS1-1 [UniParc]FASTAAdd to Basket

« Hide

MQNSHSGVNQ LGGVFVNGRP LPDSTRQKIV ELAHSGARPC DISRILQVSN    50
GCVSKILGRY YETGSIRPRA IGGSKPRVAT PEVVSKIAQY KRECPSIFAW 100
EIRDRLLSEG VCTNDNIPSV SSINRVLRNL ASEKQQMGAD GMYDKLRMLN 150
GQTGSWGTRP GWYPGTSVPG QPTQDGCQQQ EGGGENTNSI SSNGEDSDEA 200
QMRLQLKRKL QRNRTSFTQE QIEALEKEFE RTHYPDVFAR ERLAAKIDLP 250
EARIQVWFSN RRAKWRREEK LRNQRRQASN TPSHIPISSS FSTSVYQPIP 300
QPTTPVSSFT SGSMLGRTDT ALTNTYSALP PMPSFTMANN LPMQPPVPSQ 350
TSSYSCMLPT SPSVNGRSYD TYTPPHMQTH MNSQPMGTSG TTSTGLISPG 400
VSVPVQVPGS EPDMSQYWPR LQ 422
Length:422
Mass (Da):46,683
Last modified:February 5, 2008 - v1
Checksum:iC33CDD2C1B13C397
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY707088 mRNA. Translation: AAU12168.1.
RefSeqiNP_000271.1. NM_000280.4.
NP_001121084.1. NM_001127612.1.
NP_001245393.1. NM_001258464.1.
NP_001245394.1. NM_001258465.1.
XP_005253012.1. XM_005252955.2.
XP_005253013.1. XM_005252956.2.
UniGeneiHs.270303.
Hs.611376.

Genome annotation databases

GeneIDi5080.
KEGGihsa:5080.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY707088 mRNA. Translation: AAU12168.1 .
RefSeqi NP_000271.1. NM_000280.4.
NP_001121084.1. NM_001127612.1.
NP_001245393.1. NM_001258464.1.
NP_001245394.1. NM_001258465.1.
XP_005253012.1. XM_005252955.2.
XP_005253013.1. XM_005252956.2.
UniGenei Hs.270303.
Hs.611376.

3D structure databases

ProteinModelPortali Q66SS1.
SMRi Q66SS1. Positions 4-136, 211-278.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi Q66SS1.

Protocols and materials databases

DNASUi 5080.
Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 5080.
KEGGi hsa:5080.

Organism-specific databases

CTDi 5080.
PharmGKBi PA32960.

Phylogenomic databases

HOVERGENi HBG009115.
KOi K08031.
PhylomeDBi Q66SS1.

Miscellaneous databases

GenomeRNAii 5080.
NextBioi 19596.

Gene expression databases

ArrayExpressi Q66SS1.

Family and domain databases

Gene3Di 1.10.10.10. 2 hits.
1.10.10.60. 1 hit.
InterProi IPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
IPR001523. Paired_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF00046. Homeobox. 1 hit.
PF00292. PAX. 1 hit.
[Graphical view ]
PRINTSi PR00027. PAIREDBOX.
SMARTi SM00389. HOX. 1 hit.
SM00351. PAX. 1 hit.
[Graphical view ]
SUPFAMi SSF46689. SSF46689. 2 hits.
PROSITEi PS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
PS00034. PAIRED_1. 1 hit.
PS51057. PAIRED_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Perez-Pinera P., Bray T.L., Vega J.A., Deuel T.F.
    Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ66SS1_HUMAN
AccessioniPrimary (citable) accession number: Q66SS1
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: April 16, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi