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Q66LH7 (Q66LH7_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Cenpc RGD 1303061
Synonyms:Cenpc1 RGD 1303061
OrganismRattus norvegicus (Rat) EMBL AAU04621.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length916 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical term3D-structure PDB 4INM
Gene Ontology (GO)
   Biological_processkinetochore assembly

Inferred from electronic annotation. Source: InterPro

   Cellular_componentkinetochore

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncentromeric DNA binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q66LH7 [UniParc].

Last modified October 11, 2004. Version 1.
Checksum: 015E3614EC926C74

FASTA916103,334
        10         20         30         40         50         60 
MASFHLDHLK NYHRRFCRPS RAPNIPTKQG QNMLEILQDC FEEQNSTESL SCSTPKEKDI 

        70         80         90        100        110        120 
YVQSTGKERQ ASHSESVPIS SRRKEASLQV PAKPSDPADE PVQANEVHQK ILSTDVVSKS 

       130        140        150        160        170        180 
TPDSTKTSSK GVKGHHGASD ELYLPGGSPV VLLGARVSGS QKAISSGGQK RVTSRRSADM 

       190        200        210        220        230        240 
QSSNTDISFK TRKRLNFEDK VISNTAEIES SASQVEDSIS EEQEGTSSET SQKRDDLSSE 

       250        260        270        280        290        300 
IQPQSKKSFS ELYLETVNRK SKCSSVVRHT AAVPSPPYPP NDMKLLEDEF IIDGPDRSFS 

       310        320        330        340        350        360 
SQPWVVIPRK GHHMPFPENI AVPQGKKSRE KPHRLSEKTL VSNTQTDKTG PVEEAQLSVE 

       370        380        390        400        410        420 
EKLGTTLTNE LENDCRSTEN KTHSENAKKP SARKRTVKQK QRRPSKPNIA QELSMGQNET 

       430        440        450        460        470        480 
ENRNMSKIGQ DKLQINSKRN MEDHEEVRNE PTPKKPVPAL GNKKEKDSTQ ANKEKSRKKC 

       490        500        510        520        530        540 
FSRESKRKSV PKEVTLASRR GRRTSQHPSE WWLVKPSEGS VDGNSSKENE SSILYPNRKK 

       550        560        570        580        590        600 
QTKRNHVSEN TEKKPVPSKR KKKEISSREL KSLNVKGSGG NDDISTSQRK PLQNIDADPT 

       610        620        630        640        650        660 
QKSLHCSGPT RGSEDQNSDM ISQNVHLKTR SEQHRSKTQM ESTSNSEVCK HSVWEESGPS 

       670        680        690        700        710        720 
RFKNLEMPGR SNSEVGDEKD QKSLDLKTRS SNMVPNRNLH HKLVLPSNSP NVRRSNRIRL 

       730        740        750        760        770        780 
KPLEYWRGER IDYQESSSGR LVLEIVSPAS ESVKRKAKRN LDKVNKETNK KRIHLDNPTK 

       790        800        810        820        830        840 
TKIKVSLDIP LGDPFQATLA KDPETREIVP MDLIRPRDTY HFFVEQHGLK VYKTLNTTFF 

       850        860        870        880        890        900 
STGKLVLGPH EEKGKQHVGQ DILVFYVNFG DLLCTLHETP YMLTTGDSFY VPSGNHYNIK 

       910 
NLLNVESCLL FTQIKR 

« Hide

References

[1]"Adaptive evolution of centromere proteins in plants and animals."
Talbert P.B., Bryson T.D., Henikoff S.
J. Biol. 3:18-18(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Sprague-Dawley EMBL AAU04621.1.
[2]"A conserved mechanism for centromeric nucleosome recognition by centromere protein CENP-C."
Kato H., Jiang J., Zhou B.R., Rozendaal M., Feng H., Ghirlando R., Xiao T.S., Straight A.F., Bai Y.
Science 340:1110-1113(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (3.50 ANGSTROMS) OF 710-734.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY693788 mRNA. Translation: AAU04621.1.
RefSeqNP_001004098.1. NM_001004098.1.
UniGeneRn.85211.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4INMX-ray3.50U/V/W/X710-734[»]
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PaxDbQ66LH7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID305270.
KEGGrno:305270.

Organism-specific databases

CTD1060.
RGD1303061. Cenpc.

Phylogenomic databases

eggNOGNOG259274.
HOGENOMHOG000090256.
HOVERGENHBG050891.
InParanoidQ66LH7.
KOK11497.

Gene expression databases

GenevestigatorQ66LH7.

Family and domain databases

Gene3D2.60.120.10. 1 hit.
InterProIPR028386. CENP-C/Mif2/cnp3.
IPR028931. CENP-C_mid.
IPR028052. CENP_C_N_dom.
IPR025974. Mif2/CENP-C_cupin.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PANTHERPTHR16684. PTHR16684. 1 hit.
PfamPF11699. CENP-C_C. 1 hit.
PF15620. CENP-C_mid. 1 hit.
PF15622. CENP_C_N. 1 hit.
[Graphical view]
SUPFAMSSF51182. SSF51182. 1 hit.
ProtoNetSearch...

Other

NextBio654308.

Entry information

Entry nameQ66LH7_RAT
AccessionPrimary (citable) accession number: Q66LH7
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2004
Last sequence update: October 11, 2004
Last modified: April 16, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)