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Q66L63 (Q66L63_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Transglutaminase 2, C polypeptide EMBL AAH78420.1
Gene names
Name:tgm2a ZFIN ZDB-GENE-040912-78
Synonyms:tgm2 ZFIN ZDB-GENE-040912-78
OrganismDanio rerio (Zebrafish) (Brachydanio rerio) EMBL AAH78420.1
Taxonomic identifier7955 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length679 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Cofactor

Binds 1 calcium ion per subunit By similarity. PIRSR PIRSR000459-2

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site2711 By similarity PIRSR PIRSR000459-1
Active site3271 By similarity PIRSR PIRSR000459-1
Active site3501 By similarity PIRSR PIRSR000459-1
Metal binding3901Calcium By similarity PIRSR PIRSR000459-2
Metal binding3921Calcium By similarity PIRSR PIRSR000459-2
Metal binding4391Calcium By similarity PIRSR PIRSR000459-2
Metal binding4441Calcium By similarity PIRSR PIRSR000459-2

Sequences

Sequence LengthMass (Da)Tools
Q66L63 [UniParc].

Last modified October 11, 2004. Version 1.
Checksum: 0CF6744DAE4E8F27

FASTA67975,756
        10         20         30         40         50         60 
MERVVEIGSI DLACEVNNTN HHTHLNGVDR LIVRRGQTFT IHLHLKEGTH FQNGDNIKFI 

        70         80         90        100        110        120 
AQTGPIPSVE AQTKARFSLS KVISRLSWSA TAETHNSTVS LSICAHTNAP VGRYTLILDQ 

       130        140        150        160        170        180 
GDGVILGEFV LLFNPWGKLD SVYLANEAER EEYVLSQDGL IYRGTPKRIT VLPWTFGQFE 

       190        200        210        220        230        240 
HGILDICLQI LDESPNYISD AALDCSERKN AVYVTRVLSA MINSLGDKGV VVGNWSDDYE 

       250        260        270        280        290        300 
DGVKPTVWKD SCSILRQWSN EGCRAVRYGQ CWVFAAVACT VSRALGIPCR VITNFGSARD 

       310        320        330        340        350        360 
SNGDLIMERF YNEFDENIAD DSIWNYHVWV ENWMTRPDLA LGYEGWQASD PTPQHRSDGV 

       370        380        390        400        410        420 
FCCGPASVRA IKEGELTFKF DVPFVYAEVN ADVVEYIKLR DGRVFKMGGS TTEIGKSIST 

       430        440        450        460        470        480 
KAVGRDERED ITHNYKYPEG SEEERKVFKK ANHHNKLAQA GEEPGLHIKI RVTPDMQIGS 

       490        500        510        520        530        540 
DFDVYAEIKN NTMVTKSCRV MFYAQAVSYN GTLGETCGLG DFTEMSLASS DGGKVTLRLE 

       550        560        570        580        590        600 
YAEYSKAITQ DRMIKLVGLL IDAETREFYR AKKTIVLDAP EIIVNILGVP KVGRNLVADL 

       610        620        630        640        650        660 
ALQNPLPEPL ENCVFTIHGA NLTDGKPITH EVGTIGPKEF ATAKVEFAPK LPGQRKLIID 

       670 
FASDKLHNIE TYENLVIYE

« Hide

References

[1]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: Singapore local strain EMBL AAH78420.1.
Tissue: Embryo EMBL AAH78420.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC078420 mRNA. Translation: AAH78420.1.
IPIIPI00832151.
RefSeqNP_001004647.1. NM_001004647.2.
UniGeneDr.88666.

3D structure databases

ProteinModelPortalQ66L63.
ModBaseSearch...

Protein-protein interaction databases

STRING7955.ENSDARP00000093487.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID447909.
KEGGdre:447909.

Organism-specific databases

CTD447909.
ZFINZDB-GENE-040912-78. tgm2a.

Phylogenomic databases

eggNOGNOG80379.
HOGENOMHOG000231695.
HOVERGENHBG004342.
InParanoidQ66L63.
KOK05625.
OrthoDBEOG4GMTWG.

Family and domain databases

Gene3D2.60.40.10. 3 hits.
InterProIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERPTHR11590. PTHR11590. 1 hit.
PfamPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFPIRSF000459. TGM_EBP42. 1 hit.
SMARTSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMSSF81296. Ig_E-set. 1 hit.
SSF49309. Transglut_C. 2 hits.
PROSITEPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20832428.

Entry information

Entry nameQ66L63_DANRE
AccessionPrimary (citable) accession number: Q66L63
Entry history
Integrated into UniProtKB/TrEMBL: October 11, 2004
Last sequence update: October 11, 2004
Last modified: April 3, 2013
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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