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Q66HP7

- Q66HP7_RAT

UniProt

Q66HP7 - Q66HP7_RAT

Protein
Submitted name:

YME1-like 1 (S. cerevisiae)

Gene

Yme1l1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 86 (01 Oct 2014)
      Sequence version 1 (11 Oct 2004)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. metalloendopeptidase activity Source: InterPro
    3. nucleoside-triphosphatase activity Source: InterPro

    Protein family/group databases

    MEROPSiM41.026.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    YME1-like 1 (S. cerevisiae)Imported
    Gene namesi
    Name:Yme1l1Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

    Organism-specific databases

    RGDi620764. Yme1l1.

    Subcellular locationi

    GO - Cellular componenti

    1. membrane Source: InterPro

    Expressioni

    Gene expression databases

    GenevestigatoriQ66HP7.

    Interactioni

    Protein-protein interaction databases

    STRINGi10116.ENSRNOP00000023395.

    Structurei

    3D structure databases

    ProteinModelPortaliQ66HP7.
    SMRiQ66HP7. Positions 277-522.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOVERGENiHBG057127.
    InParanoidiQ66HP7.
    KOiK08955.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    HAMAPiMF_01458. FtsH.
    InterProiIPR003593. AAA+_ATPase.
    IPR003959. ATPase_AAA_core.
    IPR003960. ATPase_AAA_CS.
    IPR005936. FtsH.
    IPR027417. P-loop_NTPase.
    IPR000642. Peptidase_M41.
    [Graphical view]
    PfamiPF00004. AAA. 1 hit.
    PF01434. Peptidase_M41. 1 hit.
    [Graphical view]
    SMARTiSM00382. AAA. 1 hit.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR01241. FtsH_fam. 1 hit.
    PROSITEiPS00674. AAA. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q66HP7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MFSLSSTVQP QVTVPLSHLI NAFHSPKNIS VSVNTSASPK QHRDTVAEHE    50
    APSSEPVLNL RDLGLSELKI GQTDKLVENL LPGFYKDKRV SSCWHTSHIS 100
    AQSFFENKYG HLDMFSTLRS SSLYRQHPKT LQSICSDLQN FPVFIQSRGF 150
    KTLKSRTRRL QSTSERLAEA QNIAPSFVKG FLLRDRGTDL ESLDKLMKTK 200
    NIPEVHQDAF KTGFAEGFLK AQALTQKTND SLRRTRLILF VLLLFGIYGL 250
    LKNPFLSVRF RTTTGLDSAV DPVQMKNVTF EHVKGVEEAK QELQEVVEFL 300
    KNPQKFTVLG GKLPKGILLV GPPGTGKTLL ARAVAGEADV PFYYASGSEF 350
    DEMFVGVGAS RIRNLFREAK ANAPCVIFID ELDSVGGKRI ESPMHPYSRQ 400
    TINQLLAEMD GFKPNEGVII IGATNFPEAL DNALIRPGRF DMQVTVPRPD 450
    VKGRTEILKW YLNKIKFDKS VDPEIIARGT VGFSGAELEN LVNQAALKAA 500
    VDGKEMVTMK ELEFSKDKIL MGPERRSVEI DNKNKTITAY HESGHAIIAY 550
    YTKDAMPINK ATIMPRGPTL GHVSLLPEND RWNETRAQLL AQMDVSMGGR 600
    VAEELIFGTD HITTGASSDF DNATKIAKRM VTKFGMSEKL GVMTYSDTGK 650
    LSPETQSAIE QEIRILLRES YERAKHILKT HAKEHKNLAE ALLTYETLDA 700
    KEIQIVLEGK KLEVR 715
    Length:715
    Mass (Da):79,812
    Last modified:October 11, 2004 - v1
    Checksum:i4140E6183783C9CD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC081751 mRNA. Translation: AAH81751.1.
    RefSeqiNP_446134.2. NM_053682.2.
    UniGeneiRn.8153.

    Genome annotation databases

    GeneIDi114217.
    KEGGirno:114217.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC081751 mRNA. Translation: AAH81751.1 .
    RefSeqi NP_446134.2. NM_053682.2.
    UniGenei Rn.8153.

    3D structure databases

    ProteinModelPortali Q66HP7.
    SMRi Q66HP7. Positions 277-522.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10116.ENSRNOP00000023395.

    Protein family/group databases

    MEROPSi M41.026.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 114217.
    KEGGi rno:114217.

    Organism-specific databases

    CTDi 10730.
    RGDi 620764. Yme1l1.

    Phylogenomic databases

    HOVERGENi HBG057127.
    InParanoidi Q66HP7.
    KOi K08955.

    Miscellaneous databases

    NextBioi 618441.

    Gene expression databases

    Genevestigatori Q66HP7.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    HAMAPi MF_01458. FtsH.
    InterProi IPR003593. AAA+_ATPase.
    IPR003959. ATPase_AAA_core.
    IPR003960. ATPase_AAA_CS.
    IPR005936. FtsH.
    IPR027417. P-loop_NTPase.
    IPR000642. Peptidase_M41.
    [Graphical view ]
    Pfami PF00004. AAA. 1 hit.
    PF01434. Peptidase_M41. 1 hit.
    [Graphical view ]
    SMARTi SM00382. AAA. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR01241. FtsH_fam. 1 hit.
    PROSITEi PS00674. AAA. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
      , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: KidneyImported.

    Entry informationi

    Entry nameiQ66HP7_RAT
    AccessioniPrimary (citable) accession number: Q66HP7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 11, 2004
    Last sequence update: October 11, 2004
    Last modified: October 1, 2014
    This is version 86 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)