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Q66HP7

- Q66HP7_RAT

UniProt

Q66HP7 - Q66HP7_RAT

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Protein
Submitted name:

YME1-like 1 (S. cerevisiae)

Gene
Yme1l1
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. metalloendopeptidase activity Source: InterPro
  3. nucleoside-triphosphatase activity Source: InterPro
Complete GO annotation...

Protein family/group databases

MEROPSiM41.026.

Names & Taxonomyi

Protein namesi
Submitted name:
YME1-like 1 (S. cerevisiae)Imported
Gene namesi
Name:Yme1l1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi620764. Yme1l1.

Subcellular locationi

GO - Cellular componenti

  1. membrane Source: InterPro
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ66HP7.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000023395.

Structurei

3D structure databases

ProteinModelPortaliQ66HP7.
SMRiQ66HP7. Positions 277-522.

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG057127.
InParanoidiQ66HP7.
KOiK08955.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_01458. FtsH.
InterProiIPR003593. AAA+_ATPase.
IPR003959. ATPase_AAA_core.
IPR003960. ATPase_AAA_CS.
IPR005936. FtsH.
IPR027417. P-loop_NTPase.
IPR000642. Peptidase_M41.
[Graphical view]
PfamiPF00004. AAA. 1 hit.
PF01434. Peptidase_M41. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR01241. FtsH_fam. 1 hit.
PROSITEiPS00674. AAA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q66HP7-1 [UniParc]FASTAAdd to Basket

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MFSLSSTVQP QVTVPLSHLI NAFHSPKNIS VSVNTSASPK QHRDTVAEHE    50
APSSEPVLNL RDLGLSELKI GQTDKLVENL LPGFYKDKRV SSCWHTSHIS 100
AQSFFENKYG HLDMFSTLRS SSLYRQHPKT LQSICSDLQN FPVFIQSRGF 150
KTLKSRTRRL QSTSERLAEA QNIAPSFVKG FLLRDRGTDL ESLDKLMKTK 200
NIPEVHQDAF KTGFAEGFLK AQALTQKTND SLRRTRLILF VLLLFGIYGL 250
LKNPFLSVRF RTTTGLDSAV DPVQMKNVTF EHVKGVEEAK QELQEVVEFL 300
KNPQKFTVLG GKLPKGILLV GPPGTGKTLL ARAVAGEADV PFYYASGSEF 350
DEMFVGVGAS RIRNLFREAK ANAPCVIFID ELDSVGGKRI ESPMHPYSRQ 400
TINQLLAEMD GFKPNEGVII IGATNFPEAL DNALIRPGRF DMQVTVPRPD 450
VKGRTEILKW YLNKIKFDKS VDPEIIARGT VGFSGAELEN LVNQAALKAA 500
VDGKEMVTMK ELEFSKDKIL MGPERRSVEI DNKNKTITAY HESGHAIIAY 550
YTKDAMPINK ATIMPRGPTL GHVSLLPEND RWNETRAQLL AQMDVSMGGR 600
VAEELIFGTD HITTGASSDF DNATKIAKRM VTKFGMSEKL GVMTYSDTGK 650
LSPETQSAIE QEIRILLRES YERAKHILKT HAKEHKNLAE ALLTYETLDA 700
KEIQIVLEGK KLEVR 715
Length:715
Mass (Da):79,812
Last modified:October 11, 2004 - v1
Checksum:i4140E6183783C9CD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC081751 mRNA. Translation: AAH81751.1.
RefSeqiNP_446134.2. NM_053682.2.
UniGeneiRn.8153.

Genome annotation databases

GeneIDi114217.
KEGGirno:114217.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC081751 mRNA. Translation: AAH81751.1 .
RefSeqi NP_446134.2. NM_053682.2.
UniGenei Rn.8153.

3D structure databases

ProteinModelPortali Q66HP7.
SMRi Q66HP7. Positions 277-522.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10116.ENSRNOP00000023395.

Protein family/group databases

MEROPSi M41.026.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 114217.
KEGGi rno:114217.

Organism-specific databases

CTDi 10730.
RGDi 620764. Yme1l1.

Phylogenomic databases

HOVERGENi HBG057127.
InParanoidi Q66HP7.
KOi K08955.

Miscellaneous databases

NextBioi 618441.

Gene expression databases

Genevestigatori Q66HP7.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_01458. FtsH.
InterProi IPR003593. AAA+_ATPase.
IPR003959. ATPase_AAA_core.
IPR003960. ATPase_AAA_CS.
IPR005936. FtsH.
IPR027417. P-loop_NTPase.
IPR000642. Peptidase_M41.
[Graphical view ]
Pfami PF00004. AAA. 1 hit.
PF01434. Peptidase_M41. 1 hit.
[Graphical view ]
SMARTi SM00382. AAA. 1 hit.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR01241. FtsH_fam. 1 hit.
PROSITEi PS00674. AAA. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: KidneyImported.

Entry informationi

Entry nameiQ66HP7_RAT
AccessioniPrimary (citable) accession number: Q66HP7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2004
Last sequence update: October 11, 2004
Last modified: May 14, 2014
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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