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Protein

Fibrous sheath-interacting protein 1

Gene

Fsip1

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Fibrous sheath-interacting protein 1
Gene namesi
Name:Fsip1
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 3

Organism-specific databases

RGDi1306874. Fsip1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 438438Fibrous sheath-interacting protein 1PRO_0000314921Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei71 – 711PhosphoserineCombined sources
Modified residuei88 – 881PhosphoserineCombined sources
Modified residuei89 – 891PhosphoserineCombined sources

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ66H16.
PRIDEiQ66H16.

PTM databases

iPTMnetiQ66H16.
PhosphoSiteiQ66H16.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000007808.

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili131 – 15727Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the FSIP1 family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiENOG410J06C. Eukaryota.
ENOG41120JM. LUCA.
GeneTreeiENSGT00390000013879.
HOGENOMiHOG000112659.
HOVERGENiHBG098301.
InParanoidiQ66H16.
OMAiKCLQFSK.
OrthoDBiEOG776SRS.
PhylomeDBiQ66H16.
TreeFamiTF351151.

Family and domain databases

InterProiIPR026246. Fsip1.
[Graphical view]
PANTHERiPTHR22012. PTHR22012. 1 hit.
PfamiPF15554. FSIP1. 1 hit.
[Graphical view]
PRINTSiPR02075. FIBSHEATHIP1.

Sequencei

Sequence statusi: Complete.

Q66H16-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSMDIIKGNL DGISKPASSS RSRPGSRSSN GSLEVLSPEP GPVKIDMVNK
60 70 80 90 100
LNSGKEGHTS DSRVEERRKI SDDEWADNPR STEPAQESSD EDSNLSQPQG
110 120 130 140 150
TPEHSDDPKL EGTDAVLQNA IHKMHRLDKI LAKRRIREKE IKKQGLEMRI
160 170 180 190 200
KLWEELKSAK NTEDLENDEE LENTKKFLYL TSKSAGTAAE PLHCKFEDDL
210 220 230 240 250
FSVFHTQIPQ ETYENHTEKD FTCDVEKNGP LIKTEKQPFS NTEAIEPRSE
260 270 280 290 300
HSQVFIIRNA EHSQDFIKRN IELAKSSRSP VVMVEGEKKR LDELLKGLED
310 320 330 340 350
TDSGLSSSEG DQCAWLVPGE GYTLAATESQ QLAEIDIKLQ ELSVDSPAVF
360 370 380 390 400
SLESQSNKGD MEHDSNEERN TEPTPGEKIL RDNKEQRDRE SRLRAIDGKL
410 420 430
KEINEQVEEC PVITPGKRNE RITWRWLLAK ILEPECKV
Length:438
Mass (Da):49,568
Last modified:October 11, 2004 - v1
Checksum:i47361C2C0CC12A30
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC082080 mRNA. Translation: AAH82080.1.
RefSeqiNP_001013096.1. NM_001013078.1.
UniGeneiRn.103274.

Genome annotation databases

EnsembliENSRNOT00000007808; ENSRNOP00000007808; ENSRNOG00000005888.
GeneIDi296074.
KEGGirno:296074.
UCSCiRGD:1306874. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC082080 mRNA. Translation: AAH82080.1.
RefSeqiNP_001013096.1. NM_001013078.1.
UniGeneiRn.103274.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000007808.

PTM databases

iPTMnetiQ66H16.
PhosphoSiteiQ66H16.

Proteomic databases

PaxDbiQ66H16.
PRIDEiQ66H16.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000007808; ENSRNOP00000007808; ENSRNOG00000005888.
GeneIDi296074.
KEGGirno:296074.
UCSCiRGD:1306874. rat.

Organism-specific databases

CTDi161835.
RGDi1306874. Fsip1.

Phylogenomic databases

eggNOGiENOG410J06C. Eukaryota.
ENOG41120JM. LUCA.
GeneTreeiENSGT00390000013879.
HOGENOMiHOG000112659.
HOVERGENiHBG098301.
InParanoidiQ66H16.
OMAiKCLQFSK.
OrthoDBiEOG776SRS.
PhylomeDBiQ66H16.
TreeFamiTF351151.

Miscellaneous databases

PROiQ66H16.

Family and domain databases

InterProiIPR026246. Fsip1.
[Graphical view]
PANTHERiPTHR22012. PTHR22012. 1 hit.
PfamiPF15554. FSIP1. 1 hit.
[Graphical view]
PRINTSiPR02075. FIBSHEATHIP1.
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis.
  2. "Quantitative maps of protein phosphorylation sites across 14 different rat organs and tissues."
    Lundby A., Secher A., Lage K., Nordsborg N.B., Dmytriyev A., Lundby C., Olsen J.V.
    Nat. Commun. 3:876-876(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-71; SER-88 AND SER-89, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiFSIP1_RAT
AccessioniPrimary (citable) accession number: Q66H16
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: October 11, 2004
Last modified: June 8, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.