Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

At1g78120

Gene
N/A
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
At1g78120Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

PTM / Processingi

Proteomic databases

PaxDbiQ66GS5.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G78120.1.

Structurei

3D structure databases

ProteinModelPortaliQ66GS5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini159 – 495337TPR_REGIONInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1124. Eukaryota.
COG0457. LUCA.
HOGENOMiHOG000237654.

Family and domain databases

Gene3Di1.25.40.10. 2 hits.
InterProiIPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF13181. TPR_8. 1 hit.
[Graphical view]
SMARTiSM00028. TPR. 8 hits.
[Graphical view]
SUPFAMiSSF48452. SSF48452. 3 hits.
PROSITEiPS50005. TPR. 7 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q66GS5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKSKKISTG QIFGCESLLG CIFQSWSPRR RKPSLPEKDH RAKDNLSSKS
60 70 80 90 100
STTVTNPKIL PRKSTDTSSQ PKKSDSQKPQ QKPKPDENHP RKSSESARKS
110 120 130 140 150
SDSARKSISS GSSRTESKRF SLNGVMGNII VKPQPAVKTD VTQTKSRWEG
160 170 180 190 200
KPVNHRLDPE TLKKMGNEEY CRGRFGQALV FYERAISADP KTPTYWPNKS
210 220 230 240 250
AALISLGRLL EASDACEEAL RLNPTYERAH QRLASLQLRL GEVEKALCHY
260 270 280 290 300
NEAGKYTETK HIEQVEDVVK CLRRCDEARR SKEWNVALKE TLFAISYGAD
310 320 330 340 350
SSPRVYALQT EALLHLQRHE EAYSVYQKGT KRFDIDSFIK IFGLSLTSYL
360 370 380 390 400
LMVGAQVYIA VGRFEDAVTA SRQAARLDPS SEEVNAVARK ARAVASARLS
410 420 430 440 450
GNLLFNASKF EGASVVYTEG LENDPYNALL LCNRAASRFK LDLFEKAIED
460 470 480 490 500
CTLALSLQPS YRKARRRRAD SYAKLEKWQH AIQDYELLMM ETPEDEETRR
510 520 530
ALTEVNVRFK KQTGGDVRFK GVGSELVVAN
Length:530
Mass (Da):59,630
Last modified:October 11, 2004 - v1
Checksum:iBA407C381913330F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT015327 mRNA. Translation: AAU05450.1.
BT015840 mRNA. Translation: AAU94403.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT015327 mRNA. Translation: AAU05450.1.
BT015840 mRNA. Translation: AAU94403.1.

3D structure databases

ProteinModelPortaliQ66GS5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT1G78120.1.

Proteomic databases

PaxDbiQ66GS5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiKOG1124. Eukaryota.
COG0457. LUCA.
HOGENOMiHOG000237654.

Family and domain databases

Gene3Di1.25.40.10. 2 hits.
InterProiIPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF13181. TPR_8. 1 hit.
[Graphical view]
SMARTiSM00028. TPR. 8 hits.
[Graphical view]
SUPFAMiSSF48452. SSF48452. 3 hits.
PROSITEiPS50005. TPR. 7 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Arabidopsis ORF clones."
    Cheuk R., Chen H., Kim C.J., Shinn P., Ecker J.R.
    Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Arabidopsis ORF clones."
    Kim C.J., Chen H., Cheuk R., Shinn P., Ecker J.R.
    Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ66GS5_ARATH
AccessioniPrimary (citable) accession number: Q66GS5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2004
Last sequence update: October 11, 2004
Last modified: May 11, 2016
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.