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Protein
Submitted name:

Possible type III secretion protein EscC/SpiA, outer membrane pore

Gene

YPTB0312

Organism
Yersinia pseudotuberculosis serotype I (strain IP32953)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciYPSE273123:GI1M-342-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Possible type III secretion protein EscC/SpiA, outer membrane poreImported
Gene namesi
Ordered Locus Names:YPTB0312Imported
OrganismiYersinia pseudotuberculosis serotype I (strain IP32953)Imported
Taxonomic identifieri273123 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
Proteomesi
  • UP000001011 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini205 – 29793Secretin_NInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000245123.
KOiK03219.
OMAiNAVIVHD.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q66FM4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIVGLRQKPY LNLRNYKWMS LIYIMRKITG LILLFFATLL PYGKFSYGKA
60 70 80 90 100
IPWQGEPFFI YSRGMTVSEL LKDLGMNYGI PVVISSEINE HFTGKIRDKT
110 120 130 140 150
PEKILSELAG RYNITWYYDG ETLYFYPVQS IKREFISPDG LAANTLVKYL
160 170 180 190 200
QRGDVLAGKN CAIKAIPHLD TLEVKGVPIC IERVKSVSKM LSEQVRHQNQ
210 220 230 240 250
NKETVKVFPL KYASAADSDY QYRDQNVRLP GLVSVLRELN QGNNLPLAGG
260 270 280 290 300
NQPDGNQASS PVFSADPRQN AVIIRDRQAN MPIYRSLITQ LDQRPIQIEI
310 320 330 340 350
SVTIIDVDAG DISQLGVDWS ASASIGGTGV SFNSTFAKNN AEGFSTVIGD
360 370 380 390 400
TGNFMVRLNA LQKNSRARIL SQPSVVTLNN IQAVLDKNVT FYTKLQGEKV
410 420 430 440 450
AKLESVTSGS LLRVTPRMIE TEGVQEVLLN LNIQDGQQQA STNSNEPLPE
460 470 480 490 500
IRNSDISTQA TLQVGQSLLL GGFIQDTQIE SQNKIPLLGD IPLLGGLFRS
510 520
TDKQSHSVVR LFLIKAVPVN AGE
Length:523
Mass (Da):57,974
Last modified:October 11, 2004 - v1
Checksum:i658BB7464C5CBCDA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX936398 Genomic DNA. Translation: CAH19552.1.

Genome annotation databases

EnsemblBacteriaiCAH19552; CAH19552; YPTB0312.
KEGGiyps:YPTB0312.
PATRICi18638777. VBIYerPse22266_0488.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX936398 Genomic DNA. Translation: CAH19552.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAH19552; CAH19552; YPTB0312.
KEGGiyps:YPTB0312.
PATRICi18638777. VBIYerPse22266_0488.

Phylogenomic databases

HOGENOMiHOG000245123.
KOiK03219.
OMAiNAVIVHD.

Enzyme and pathway databases

BioCyciYPSE273123:GI1M-342-MONOMER.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ66FM4_YERPS
AccessioniPrimary (citable) accession number: Q66FM4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2004
Last sequence update: October 11, 2004
Last modified: September 7, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.