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Protein
Submitted name:

YscC putative type III secretion protein

Gene

pYV0079

Organism
Yersinia pseudotuberculosis serotype I (strain IP32953)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciYPSE273123:GI1M-4106-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
YscC putative type III secretion proteinImported
Gene namesi
Ordered Locus Names:pYV0079Imported
Encoded oniPlasmid pYVImported
OrganismiYersinia pseudotuberculosis serotype I (strain IP32953)Imported
Taxonomic identifieri273123 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesYersiniaceaeYersinia
Proteomesi
  • UP000001011 Componenti: Plasmid pYV

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26Sequence analysisAdd BLAST26
ChainiPRO_500426823427 – 607Sequence analysisAdd BLAST581

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini185 – 280Secretin_NInterPro annotationAdd BLAST96

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

HOGENOMiHOG000219614.
KOiK03219.
OMAiYLMARIS.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q663I7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFPLHSFFK RVLTGTLLLL SNYSWAQELD WLPIPYVYVA KGESLRDLLI
60 70 80 90 100
DFSANYDATV VVSDKINDKV SGQFEHDNPQ DFLQHIASLY NLVWYYDGNV
110 120 130 140 150
LYIFKNSEVA SRLIRLQESE AAELKLALQR SGIWEPRFGW RPDASNRLVY
160 170 180 190 200
VSGPPRYLEL VEQTAAALEQ QTQIRSEKTG ALAIEIFPLK YASASDRTIH
210 220 230 240 250
YRDDEVAAPG VATILQRVLS DATIQQVTVD NQRIPQAATR ASAQAKVEAD
260 270 280 290 300
PSLNAIIVRD SPERMPMYQR LIHALDKPSA RIEVALSIVD INADQLTELG
310 320 330 340 350
VDWRVGIRTG NNHQVVIKTT GDQSNIASNG ALGSLIDARG LDYLLARVNL
360 370 380 390 400
LENEGSAQVV SRPTLLTQEN AQAVIDHHET YYVKVTGKEV AELKGITYGT
410 420 430 440 450
MLRMTPRVLT QGDKSEISLN LHIEDGNQKP NSSGIDGIPT ISRTVVDTVA
460 470 480 490 500
RVGHGQSLII GGIYRDELSV ALSKVPLLGD IPYLGALFRR KSELTRRTVR
510 520 530 540 550
LFIIEPRIID EGIAHHLALG NGRDLRTGIL AVDEISNQST TLNKLLGVSQ
560 570 580 590 600
CQPLNKAQEV QKWLSQNNKS SYLTQCKMDK SLGWRVVEGA CTPAESWCVS

APKRGVL
Length:607
Mass (Da):67,327
Last modified:October 11, 2004 - v1
Checksum:iA8DA3FF5FECE0C92
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX936399 Genomic DNA. Translation: CAF25422.1.
RefSeqiWP_011191388.1. NZ_CP009711.1.

Genome annotation databases

EnsemblBacteriaiCAF25422; CAF25422; pYV0079.
KEGGiypo:BZ17_4256.
yps:pYV0079.
PATRICi18637912. VBIYerPse22266_0083.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX936399 Genomic DNA. Translation: CAF25422.1.
RefSeqiWP_011191388.1. NZ_CP009711.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAF25422; CAF25422; pYV0079.
KEGGiypo:BZ17_4256.
yps:pYV0079.
PATRICi18637912. VBIYerPse22266_0083.

Phylogenomic databases

HOGENOMiHOG000219614.
KOiK03219.
OMAiYLMARIS.

Enzyme and pathway databases

BioCyciYPSE273123:GI1M-4106-MONOMER.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ663I7_YERPS
AccessioniPrimary (citable) accession number: Q663I7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 11, 2004
Last sequence update: October 11, 2004
Last modified: November 2, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported, PlasmidImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.