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Protein
Submitted name:

ORF I

Gene
N/A
Organism
Cassava vein mosaic virus (CsVMV)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
ORF IImported
OrganismiCassava vein mosaic virus (CsVMV)Imported
Taxonomic identifieri38062 [NCBI]
Taxonomic lineageiVirusesRetro-transcribing virusesCaulimoviridaeCavemovirus
Virus hostiManihot esculenta (Cassava) (Jatropha manihot) [TaxID: 3983]

Structurei

3D structure databases

ProteinModelPortaliQ66275.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini740 – 756CCHC-typeInterPro annotationAdd BLAST17

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili126 – 153Sequence analysisAdd BLAST28
Coiled coili244 – 267Sequence analysisAdd BLAST24
Coiled coili304 – 348Sequence analysisAdd BLAST45

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerSAAS annotation

Family and domain databases

Gene3Di4.10.60.10. 1 hit.
InterProiIPR001969. Aspartic_peptidase_AS.
IPR028919. Viral_movement.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF01107. MP. 1 hit.
PF00098. zf-CCHC. 1 hit.
[Graphical view]
SMARTiSM00343. ZnF_C2HC. 1 hit.
[Graphical view]
SUPFAMiSSF57756. SSF57756. 1 hit.
PROSITEiPS00141. ASP_PROTEASE. 1 hit.
PS50158. ZF_CCHC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q66275-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDSKDFTQLN LEEHSYKVNT QKLPIDSYIQ YGGFTYANFT PYIIHGDDGF
60 70 80 90 100
GEHKQLNWTN KLLWNKLGKL NIKDTQILMQ NNISEEQHNE LISLEAQKIA
110 120 130 140 150
RENLADRINY LQNINTSIDF KLWKMNKENL ERQELLLRQI NELKEEIKSL
160 170 180 190 200
KNIPSTVAII PTNTYTINMI RTETEDWKYF KYIEKELVQN KTEAIAKILD
210 220 230 240 250
NSYIINDNLG LLYERYEEIN PTPKPYKRPE TIFDTPQYAK YIRNQKRQEE
260 270 280 290 300
YEKQQELKKE NENKEYQEFL EWKEKQQKDK GKGIQTVYPT LIIPDIKPEK
310 320 330 340 350
QKKEDMMLEM IKNLQNELEQ LKIQRHKEHE KQAELTKIQM LEEELEEELD
360 370 380 390 400
PDNLEKEVLN NIQNIQISSD ISESSEINEI SDNETEQISG SDSDYNNEQI
410 420 430 440 450
NVKIEGEEYE YKDNYRYYKP QPPYYKKDIR RERQYKGQSS QRADYIKNRR
460 470 480 490 500
EEFESTYQAN MNTTINDSGE ILNLDCTTPE EAEDRIQKWT QSMSIALVKQ
510 520 530 540 550
QLSNEQAKQF IRRTFIGNVK EWYKNLTNEA KQKLEGNAPL LSLTHMELGL
560 570 580 590 600
RAEFGKLGIE SDVEKHEKKT SIARHKILQL QICSMDHQNL NAYLCEFQEY
610 620 630 640 650
YYSANYTEAE SENILNMFYS KLPEPWGQQV LNGYLSEIKG KNLLDSIGAR
660 670 680 690 700
MTYLQEFISD KCKENWTQKQ ARKIQLSKNL DCSYYEVGKY GCKQIRPHKR
710 720 730 740 750
KRYYKKYIPI KRKYFNKKRY KKYYRPKKFL KRKNPHKACK CYNCGEEGHI
760 770 780 790 800
SPNCKKPKKK TRINNLEALE FKNTEMENLE FETNKNDIIW VEEIEVIQPL
810 820 830 840 850
HYEEEEKYKG NYSDRILQNP YYINSISIEE LDNLDWEFEY QEDIEDDLEY
860 870 880 890 900
QNFVYQESND NWYSDQENWY SDEQYLGIYM FIGETSGENN QDNMEGIIKE
910 920 930 940 950
YNKTEPEKIN KIIFTSEKFK QIMENDLNMT KDKIFHNNKL KKLFGKKEIE
960 970 980 990 1000
YYIVTDIEHP IDVKYVQNQD KIINLPLYNQ EIFENEIQKI PDKDQNKIRN
1010 1020 1030 1040 1050
IHLAAVEIVV KAYFREGIDT PFEIILCDDR ITYPQEGSLV EVLIGNLIYQ
1060 1070 1080 1090 1100
KVKFTKIINY SISIEDKNLD KSLVMYWNLE GIKMIKDSKI FSIRLRNLYV
1110 1120 1130 1140 1150
LSNKHIVKNK KQYNGNIIIE PIFQDVIQNN NRNYIEYGKP GKFDRTKLKS
1160 1170 1180 1190 1200
YSRRFNEPLR LDDRTNIQRE KDQIEKADHN LELQKELNNL NYYSQQGQSS
1210 1220 1230 1240 1250
NVLDIPKILK IENTKNNYKQ FHIIGKITEG RLNKFYPILI DTGAAHSYIS
1260 1270 1280 1290 1300
SKILEDEKLV SNKLSKVVTS YNADNEKHIY DRNTEVIIEL IDKNNEKYKI
1310 1320 1330 1340 1350
NFIGLVDQLR LLEGGKAEIL LGMNILQNLK PYCITDDYLE INLGFRCIKI
1360 1370
NRIKKDIFEI REDLQQMNVL NE
Length:1,372
Mass (Da):163,695
Last modified:November 1, 1996 - v1
Checksum:i0F85A16048F0999E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U20341 Genomic DNA. Translation: AAA79871.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U20341 Genomic DNA. Translation: AAA79871.1.

3D structure databases

ProteinModelPortaliQ66275.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di4.10.60.10. 1 hit.
InterProiIPR001969. Aspartic_peptidase_AS.
IPR028919. Viral_movement.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF01107. MP. 1 hit.
PF00098. zf-CCHC. 1 hit.
[Graphical view]
SMARTiSM00343. ZnF_C2HC. 1 hit.
[Graphical view]
SUPFAMiSSF57756. SSF57756. 1 hit.
PROSITEiPS00141. ASP_PROTEASE. 1 hit.
PS50158. ZF_CCHC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ66275_CSVMV
AccessioniPrimary (citable) accession number: Q66275
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.