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Protein

Arginine deiminase

Gene

arcA

Organism
Borreliella bavariensis (strain ATCC BAA-2496 / DSM 23469 / PBi) (Borrelia bavariensis)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-arginine + H2O = L-citrulline + NH3.UniRule annotation

Pathwayi: L-arginine degradation via ADI pathway

This protein is involved in step 1 of the subpathway that synthesizes carbamoyl phosphate from L-arginine.UniRule annotation
Proteins known to be involved in the 2 steps of the subpathway in this organism are:
  1. Arginine deiminase (arcA)
  2. Ornithine carbamoyltransferase, catabolic (arcB)
This subpathway is part of the pathway L-arginine degradation via ADI pathway, which is itself part of Amino-acid degradation.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes carbamoyl phosphate from L-arginine, the pathway L-arginine degradation via ADI pathway and in Amino-acid degradation.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei399 – 3991Amidino-cysteine intermediateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Arginine metabolism

Enzyme and pathway databases

BioCyciBGAR290434:BG0868-MONOMER.
UniPathwayiUPA00254; UER00364.

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine deiminaseUniRule annotation (EC:3.5.3.6UniRule annotation)
Short name:
ADIUniRule annotation
Alternative name(s):
Arginine dihydrolaseUniRule annotation
Short name:
ADUniRule annotation
Gene namesi
Name:arcAUniRule annotation
Ordered Locus Names:BG0868
OrganismiBorreliella bavariensis (strain ATCC BAA-2496 / DSM 23469 / PBi) (Borrelia bavariensis)
Taxonomic identifieri290434 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesBorreliaceaeBorreliella
Proteomesi
  • UP000002276 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 409409Arginine deiminasePRO_0000182204Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi290434.BG0868.

Structurei

3D structure databases

ProteinModelPortaliQ65ZT1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the arginine deiminase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CEU. Bacteria.
COG2235. LUCA.
HOGENOMiHOG000284535.
KOiK01478.
OMAiDVLEMHN.
OrthoDBiPOG091H06H4.

Family and domain databases

HAMAPiMF_00242. Arg_deiminase. 1 hit.
InterProiIPR003876. Arg_deiminase.
IPR033199. DDAH/AD.
[Graphical view]
PANTHERiPTHR12737. PTHR12737. 3 hits.
PIRSFiPIRSF006356. Arg_deiminase. 1 hit.
PRINTSiPR01466. ARGDEIMINASE.
TIGRFAMsiTIGR01078. arcA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q65ZT1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEGYLNPINI FSEIGRLKKV LLHRPGEELE NLTPFIMKKF LFDDIPYLEV
60 70 80 90 100
ARQEHEVFAS TLKNNSVEIE YVEDLVSEVL ASSVALKDKF ISQFILEAEI
110 120 130 140 150
KTDSTINILK DYFSNLTIDN MVSKMISGIV SKELKNYVSS LDDLVNSASL
160 170 180 190 200
FIIDPMPNVL FTRDPFASIG NGITINKMSN KVRHRETIFA EYIFKYHPIY
210 220 230 240 250
KKNVPIWFNR WEESSLEGGD EFVLSKDILV IGISERTEAE SVEKLAISLF
260 270 280 290 300
KNKTSFNTIL AFKIPKNRAY MHLDTVFTQI DYSVFTSFTS DDMYFSIYAL
310 320 330 340 350
TYNSSSSKIH VKEEKARLRD VLSFYLGRKI DIIKCAGGDL IHGAREQWND
360 370 380 390 400
GANILAIAPG EVIAYSRNHV TNKLFEENGI KVYRIPSSEL SRGRGGPRCM

SMPLVREDI
Length:409
Mass (Da):46,690
Last modified:October 11, 2004 - v1
Checksum:iC36F23CACC67DEA8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000013 Genomic DNA. Translation: AAU07690.1.
RefSeqiWP_011194134.1. NC_006156.1.

Genome annotation databases

EnsemblBacteriaiAAU07690; AAU07690; BG0868.
KEGGibga:BG0868.
PATRICi20567311. VBIBorGar102262_0952.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000013 Genomic DNA. Translation: AAU07690.1.
RefSeqiWP_011194134.1. NC_006156.1.

3D structure databases

ProteinModelPortaliQ65ZT1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi290434.BG0868.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAU07690; AAU07690; BG0868.
KEGGibga:BG0868.
PATRICi20567311. VBIBorGar102262_0952.

Phylogenomic databases

eggNOGiENOG4105CEU. Bacteria.
COG2235. LUCA.
HOGENOMiHOG000284535.
KOiK01478.
OMAiDVLEMHN.
OrthoDBiPOG091H06H4.

Enzyme and pathway databases

UniPathwayiUPA00254; UER00364.
BioCyciBGAR290434:BG0868-MONOMER.

Family and domain databases

HAMAPiMF_00242. Arg_deiminase. 1 hit.
InterProiIPR003876. Arg_deiminase.
IPR033199. DDAH/AD.
[Graphical view]
PANTHERiPTHR12737. PTHR12737. 3 hits.
PIRSFiPIRSF006356. Arg_deiminase. 1 hit.
PRINTSiPR01466. ARGDEIMINASE.
TIGRFAMsiTIGR01078. arcA. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiARCA_BORBP
AccessioniPrimary (citable) accession number: Q65ZT1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 1, 2005
Last sequence update: October 11, 2004
Last modified: September 7, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.