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Protein

Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 3, cytosolic

Gene

Os05g0495700

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

May be involved in cell redox homeostasis.By similarity

Catalytic activityi

sn-glycerol 3-phosphate + NAD+ = glycerone phosphate + NADH.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei192NAD; via amide nitrogenBy similarity1
Binding sitei192SubstrateBy similarity1
Binding sitei231NAD; via amide nitrogenBy similarity1
Active sitei281Proton acceptorBy similarity1
Binding sitei343NADBy similarity1
Binding sitei371NADBy similarity1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi44 – 49NADBy similarity6

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionOxidoreductase
LigandNAD

Names & Taxonomyi

Protein namesi
Recommended name:
Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 3, cytosolic (EC:1.1.1.8)
Gene namesi
Ordered Locus Names:Os05g0495700, LOC_Os05g41590
ORF Names:OJ1579_G03.13, OsJ_19053
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 5

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004201791 – 465Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 3, cytosolicAdd BLAST465

Proteomic databases

PaxDbiQ65X70
PRIDEiQ65X70

Expressioni

Gene expression databases

ExpressionAtlasiQ65X70 differential
GenevisibleiQ65X70 OS

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os05g41590.1

Structurei

3D structure databases

ProteinModelPortaliQ65X70
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni343 – 344Substrate bindingBy similarity2

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG2711 Eukaryota
COG0240 LUCA
HOGENOMiHOG000238366
InParanoidiQ65X70
KOiK00006
OMAiRVQVRVW
OrthoDBiEOG093609YK

Family and domain databases

Gene3Di1.10.1040.10, 1 hit
InterProiView protein in InterPro
IPR008927 6-PGluconate_DH-like_C_sf
IPR013328 6PGD_dom2
IPR006168 G3P_DH_NAD-dep
IPR006109 G3P_DH_NAD-dep_C
IPR011128 G3P_DH_NAD-dep_N
IPR036291 NAD(P)-bd_dom_sf
PfamiView protein in Pfam
PF07479 NAD_Gly3P_dh_C, 1 hit
PF01210 NAD_Gly3P_dh_N, 1 hit
PRINTSiPR00077 GPDHDRGNASE
SUPFAMiSSF48179 SSF48179, 1 hit
SSF51735 SSF51735, 2 hits

Sequencei

Sequence statusi: Complete.

Q65X70-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVGSYAAGGG RGAAVAAVAE GKLDELRRRM GKADGDLLRI VGVGGGAWGS
60 70 80 90 100
AFCALLQDAY GRHRDKAQVR VWRRPGRAVD RATAEHLFEV INSREDVLRR
110 120 130 140 150
LIRRCAYLKY VEARLGDRTL YADEILRDGF CLNMVDTPLC PLKVVTNLQE
160 170 180 190 200
AVWDADIVIN GLPSTETREV FGEIGRYWKE RIRPPVIISL AKGIEASIDP
210 220 230 240 250
VPRIITPTQM ISNATGVPLE NILYLGGPNI ASEIYNKEYA NARICGADKW
260 270 280 290 300
RKPLAKFLRQ PHFIVWDNSD LITHEVMGGL KNIYAIGAGM VAALTNESAT
310 320 330 340 350
SKSVYFSLCT SEMIYITHLL AEDPEKLAGP LLADTYVTLL KGRNAWYGQK
360 370 380 390 400
LAKGELTLEM GDSIKGKGTI QGVSAVHAFY ELLSQSSLSV THPEVKKLVA
410 420 430 440 450
PVELCPILKT LYKILIKREL ATDSILQAIR DESMYDPRER IEMSQRQCLY
460
RPSLLGLPKV DITQA
Length:465
Mass (Da):51,485
Last modified:October 25, 2004 - v1
Checksum:iA47AC2476C4472F8
GO

Sequence cautioni

The sequence BAF17847 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC112160 Genomic DNA Translation: AAU44049.1
AP008211 Genomic DNA Translation: BAF17847.1 Different initiation.
AP014961 Genomic DNA Translation: BAS94706.1
CM000142 Genomic DNA Translation: EEE64220.1
AK101484 mRNA Translation: BAG95083.1
RefSeqiXP_015637865.1, XM_015782379.1
UniGeneiOs.11570

Genome annotation databases

EnsemblPlantsiOs05t0495700-01; Os05t0495700-01; Os05g0495700
GeneIDi4339200
GrameneiOs05t0495700-01; Os05t0495700-01; Os05g0495700
KEGGiosa:4339200

Similar proteinsi

Entry informationi

Entry nameiGPDH3_ORYSJ
AccessioniPrimary (citable) accession number: Q65X70
Secondary accession number(s): A0A0P0WP71, Q0DH26
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 28, 2012
Last sequence update: October 25, 2004
Last modified: May 23, 2018
This is version 96 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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