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Q65UD8 (Q65UD8_MANSM) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:pepD EMBL AAU37422.1
Ordered Locus Names:MS0815 EMBL AAU37422.1
OrganismMannheimia succiniciproducens (strain MBEL55E) [Complete proteome] [HAMAP] EMBL AAU37422.1
Taxonomic identifier221988 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeBasfia

Protein attributes

Sequence length408 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Release of the N-terminal residue from a tripeptide. SAAS SAAS010161

Cofactor

Binds 2 zinc ions per subunit By similarity. PIRSR PIRSR037215-2 SAAS SAAS010161

Subcellular location

Cytoplasm By similarity SAAS SAAS010161.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site821 By similarity PIRSR PIRSR037215-1
Active site1751Proton acceptor By similarity PIRSR PIRSR037215-1
Metal binding801Zinc 1 By similarity PIRSR PIRSR037215-2
Metal binding1421Zinc 1 By similarity PIRSR PIRSR037215-2
Metal binding1421Zinc 2 By similarity PIRSR PIRSR037215-2
Metal binding1761Zinc 2 By similarity PIRSR PIRSR037215-2
Metal binding1981Zinc 1 By similarity PIRSR PIRSR037215-2
Metal binding3811Zinc 2 By similarity PIRSR PIRSR037215-2

Sequences

Sequence LengthMass (Da)Tools
Q65UD8 [UniParc].

Last modified October 25, 2004. Version 1.
Checksum: ACD9956C3A275194

FASTA40845,022
        10         20         30         40         50         60 
MQYNEQLLER FFNYVSLDTQ SKPGAKTSPS TQGQLKLAKI LEQELYSLGL DEIEVSKHGI 

        70         80         90        100        110        120 
VTALLPGNIE NSPTIGLIAH LDTSPQCSGK NVKPEVIENY RGGDIALGLG DEFISPVTFT 

       130        140        150        160        170        180 
FLHKLVGKTL IVTDGTTLLG ADNKAGIAEI MTALSQLKES SVPRCHIRVA FTPDEEIGLG 

       190        200        210        220        230        240 
MKFFPIEKFS CDWAYTIDGG AVGELEYENF NAAGATVTIF GRAIHPGSAK DKMVNALTLA 

       250        260        270        280        290        300 
CEFQQGFPTD EVPEKTEEKQ GFFHLNSFHG DIEKVELHYL IRDFDKQAFT QRKAFLEKWV 

       310        320        330        340        350        360 
DEFNCRKQLK EPVKVTITDN YYNMYDTVSK VPQSIELADS AMKACGIVPI HQPIRGGTDG 

       370        380        390        400 
AWLAEKGLAC PNIFTGGYNF HSKHELITLE GMCSAVDVIM KIAQLAVK 

« Hide

References

[1]"The genome sequence of the capnophilic rumen bacterium Mannheimia succiniciproducens."
Hong S.H., Kim J.S., Lee S.Y., In Y.H., Choi S.S., Rih J.K., Kim C.H., Jeong H., Hur C.G., Kim J.J.
Nat. Biotechnol. 22:1275-1281(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MBEL55E EMBL AAU37422.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE016827 Genomic DNA. Translation: AAU37422.1.
RefSeqYP_088007.1. NC_006300.1.

3D structure databases

ProteinModelPortalQ65UD8.
SMRQ65UD8. Positions 5-408.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING221988.MS0815.

Protein family/group databases

MEROPSM20.003.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAU37422; AAU37422; MS0815.
GeneID3076657.
KEGGmsu:MS0815.
PATRIC22445009. VBIManSuc86752_0746.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2195.
HOGENOMHOG000032390.
KOK01258.
OMAYVYATIP.
OrthoDBEOG6SV59Q.
ProtClustDBPRK05469.

Enzyme and pathway databases

BioCycBMAN221988:GHGM-843-MONOMER.

Family and domain databases

Gene3D3.30.70.360. 1 hit.
InterProIPR001261. ArgE/DapE_CS.
IPR002933. Peptidase_M20.
IPR011650. Peptidase_M20_dimer.
IPR010161. Peptidase_M20B.
[Graphical view]
PfamPF07687. M20_dimer. 1 hit.
PF01546. Peptidase_M20. 1 hit.
[Graphical view]
PIRSFPIRSF037215. Peptidase_M20B. 1 hit.
SUPFAMSSF55031. SSF55031. 1 hit.
TIGRFAMsTIGR01882. peptidase-T. 1 hit.
PROSITEPS00758. ARGE_DAPE_CPG2_1. 1 hit.
PS00759. ARGE_DAPE_CPG2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ65UD8_MANSM
AccessionPrimary (citable) accession number: Q65UD8
Entry history
Integrated into UniProtKB/TrEMBL: October 25, 2004
Last sequence update: October 25, 2004
Last modified: April 16, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)