Q65PK4 (Q65PK4_BACLD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase, family 18, YaaH EMBL AAU21664.1

Submitted name:
YdhD EMBL AAU39010.1

Gene names

Name:	ydhD EMBL AAU39010.1
Synonyms:	yaaH EMBL AAU21664.1
Ordered Locus Names:	BL02368, BLi00025

Organism

Bacillus licheniformis (strain DSM 13 / ATCC 14580) [Complete proteome] [HAMAP]

Taxonomic identifier

279010 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length	439 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 18 family. RuleBase RU004453

Ontologies

Keywords
Molecular function	Hydrolase EMBL AAU21664.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro chitin catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro chitinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q65PK4 [UniParc]. Last modified October 25, 2004. Version 1. Checksum: 39F3C83A606A0FBE	FASTA	439	49,997
	10 20 30 40 50 60 MRKEAFPIQI YVVKRGDTLY QIANRYRTTV NEIVATNEIP NPNRLVVGQT IVIPIAGEFY 70 80 90 100 110 120 EVRQGDTLAS IGARFNISPA ELARINRIQV SAVLPVGLLL YIPPRPRRNI ETNAYIEPRG 130 140 150 160 170 180 ESVSPALQQA AREASPYLTY LGAFSFQAKR DGTLEEPPLN NLKEIADRHR TTMMMIVTNL 190 200 210 220 230 240 ENEAFSDELG RIILTDQNVK NRLLDNIVAA ARRYGFKDIH FDFEYLRPED REAYNQFLRD 250 260 270 280 290 300 ARARFRQEGW LISTALAPKT RADQPGQWYE AHDYRAHGEI VDFVVLMTYE WGYSGGPPMA 310 320 330 340 350 360 VSPIGPVRDV IEYALTEMPA SKIVMGQNLY GYDWTLPYTP GGPLARAISP QRAIEIASEN 370 380 390 400 410 420 NAAIQYDETA QAPNFRYTDN AGKQHEVWFE DARSIQAKFD LIRELNLRGI SYWKLGLSFP 430 QNWLLIADQF NVVKETFPS

References

[1]

"The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential." Veith B., Herzberg C., Steckel S., Feesche J., Maurer K.H., Ehrenreich P., Baeumer S., Henne A., Liesegang H., Merkl R., Ehrenreich A., Gottschalk G. J. Mol. Microbiol. Biotechnol. 7:204-211(2004) [PubMed: 15383718] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13 / ATCC 14580 [Goettingen].

[2]

"Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species." Rey M.W., Ramaiya P., Nelson B.A., Brody-Karpin S.D., Zaretsky E.J., Tang M., Lopez de Leon A., Xiang H., Gusti V., Clausen I.G., Olsen P.B., Rasmussen M.D., Andersen J.T., Joergensen P.L., Larsen T.S., Sorokin A., Bolotin A., Lapidus A. , Galleron N., Ehrlich S.D., Berka R.M. Genome Biol. 5:R77.1-R77.12(2004) [PubMed: 15461803] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13 / ATCC 14580 [Novozymes].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000002 Genomic DNA. Translation: AAU21664.1. AE017333 Genomic DNA. Translation: AAU39010.1.
RefSeq	YP_077302.1. NC_006270.3. YP_089703.1. NC_006322.1.
3D structure databases
ProteinModelPortal	Q65PK4.
ModBase	Search...
Protein-protein interaction databases
STRING	Q65PK4.
Protein family/group databases
CAZy	CBM50. Carbohydrate-Binding Module Family 50. GH18. Glycoside Hydrolase Family 18.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBBACT00000054392; EBBACP00000052923; EBBACG00000054383. EBBACT00000061761; EBBACP00000060194; EBBACG00000061752.
GeneID	3028488. 3097556.
GenomeReviews	Gene locus BLi00025 in contig AE017333_GR. Gene locus BL02368 in contig CP000002_GR.
KEGG	bld:BLi00025. bli:BL02368.
NMPDR	fig|279010.5.peg.1209.
PATRIC	18945523. VBIBacLic203714_0020.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3858.
GeneTree	EBGT00050000000551.
HOGENOM	HBG337948.
OMA	WYEAHDY.
PhylomeDB	Q65PK4.
ProtClustDB	CLSK873277.
Family and domain databases
InterPro	IPR011583. Chitinase_II. IPR001223. Glyco_hydro18cat. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR018392. Peptidoglycan-bd_lysin. IPR002482. Peptidoglycan-bd_Lysin_subgr. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits.
KO	K06306.
Pfam	PF00704. Glyco_hydro_18. 1 hit. PF01476. LysM. 2 hits. [Graphical view]
SMART	SM00636. Glyco_18. 1 hit. SM00257. LysM. 2 hits. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q65PK4_BACLD

Accession

Primary (citable) accession number: Q65PK4
Secondary accession number(s): Q62ZZ4

Entry history

Integrated into UniProtKB/TrEMBL:	October 25, 2004
Last sequence update:	October 25, 2004
Last modified:	December 14, 2011
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)