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Q65PI6 (Y536_BACLD) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
UPF0213 protein BLi00048/BL00536
Gene names
Ordered Locus Names:BLi00048, BL00536
OrganismBacillus licheniformis (strain DSM 13 / ATCC 14580) [Complete proteome] [HAMAP]
Taxonomic identifier279010 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length97 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0213 family.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processDNA repair

Inferred from electronic annotation. Source: InterPro

   Cellular componentintracellular

Inferred from electronic annotation. Source: InterPro

   Molecular functionnuclease activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 9797UPF0213 protein BLi00048/BL00536
PRO_1000063659

Sequences

Sequence LengthMass (Da)Tools
Q65PI6 [UniParc].

Last modified October 25, 2004. Version 1.
Checksum: 57195773D933D4F7

FASTA9711,646
        10         20         30         40         50         60 
METNSHYFYV LSCRDGSLYA GYTNNIEKRL KTHNDGKGAK YTRARLPVKL HYAECFSTKR 

        70         80         90 
EAMQAEYYFK KLSRKNKERY IEEKRREGVD YQPAKEF

« Hide

References

[1]"The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential."
Veith B., Herzberg C., Steckel S., Feesche J., Maurer K.H., Ehrenreich P., Baeumer S., Henne A., Liesegang H., Merkl R., Ehrenreich A., Gottschalk G.
J. Mol. Microbiol. Biotechnol. 7:204-211(2004) [PubMed: 15383718] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13 / ATCC 14580.
[2]"Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species."
Rey M.W., Ramaiya P., Nelson B.A., Brody-Karpin S.D., Zaretsky E.J., Tang M., Lopez de Leon A., Xiang H., Gusti V., Clausen I.G., Olsen P.B., Rasmussen M.D., Andersen J.T., Joergensen P.L., Larsen T.S., Sorokin A., Bolotin A., Lapidus A. expand/collapse author list , Galleron N., Ehrlich S.D., Berka R.M.
Genome Biol. 5:R77.1-R77.12(2004) [PubMed: 15461803] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13 / ATCC 14580.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000002 Genomic DNA. Translation: AAU21683.1.
AE017333 Genomic DNA. Translation: AAU39028.1.
RefSeqYP_077321.1. NC_006270.3.
YP_089721.1. NC_006322.1.

3D structure databases

HSSPHSSP built from PDB template 1ZG2 based on UniProtKB Q9KGL3.
ProteinModelPortalQ65PI6.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ65PI6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBBACT00000058036; EBBACP00000056567; EBBACG00000058027.
EBBACT00000059991; EBBACP00000058424; EBBACG00000059982.
GeneID3028035.
3099012.
GenomeReviewsGene locus BLi00048 in contig AE017333_GR.
Gene locus BL00536 in contig CP000002_GR.
KEGGbld:BLi00048.
bli:BL00536.
NMPDRfig|279010.5.peg.1330.
PATRIC18945571. VBIBacLic203714_0039.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2827.
GeneTreeEBGT00050000002560.
HOGENOMHBG678874.
OMAMAYVYIV.
PhylomeDBQ65PI6.
ProtClustDBPRK00329.

Enzyme and pathway databases

BioCycBLIC279010-1:BLI00048-MONOMER.
BLIC279010:BL00536-MONOMER.

Family and domain databases

InterProIPR000305. UvrC_N.
[Graphical view]
KOK07461.
PfamPF01541. GIY-YIG. 1 hit.
[Graphical view]
SMARTSM00465. GIYc. 1 hit.
[Graphical view]
SUPFAMSSF82771. UvrC_N. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY536_BACLD
AccessionPrimary (citable) accession number: Q65PI6
Secondary accession number(s): Q62ZX5
Entry history
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: October 25, 2004
Last modified: January 25, 2012
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

SIMILARITY comments

Index of protein domains and families

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