Q65PI2 (Q65PI2_BACLD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative TatD-related deoxyribonuclease YabD EMBL AAU21687.1

Submitted name:
YabD EMBL AAU39032.1

Gene names

Name:	yabD EMBL AAU39032.1
Ordered Locus Names:	BL00532, BLi00052

Organism

Bacillus licheniformis (strain DSM 13 / ATCC 14580) [Complete proteome] [HAMAP]

Taxonomic identifier

279010 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length	255 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	endodeoxyribonuclease activity, producing 5'-phosphomonoesters Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q65PI2 [UniParc]. Last modified October 25, 2004. Version 1. Checksum: A65F7C4E536B8E88	FASTA	255	28,918
	10 20 30 40 50 60 MLFDTHAHLN AEQFNEDLEE VIARAKEEKV EHIVVVGFDR PTIKRAMELI EEYDFIYAAI 70 80 90 100 110 120 GWHPVDAIDM TDEDLAWIKD LSAHEKVVAI GEMGLDYHWD KSPKDVQKEV FRKQIALAKE 130 140 150 160 170 180 VGLPIVIHNR DATEDVVSIL REEGAEEVGG IMHCYTGSAE IAQECIDMNF YLSFGGPVTF 190 200 210 220 230 240 KNAKKPKEVV KQIPNDRLLI ETDCPYLTPH PYRGKRNEPS YVKLVAEQIA ELKGMTYEEI 250 AAVTTENAKK LFGIS

References

[1]

"The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential." Veith B., Herzberg C., Steckel S., Feesche J., Maurer K.H., Ehrenreich P., Baeumer S., Henne A., Liesegang H., Merkl R., Ehrenreich A., Gottschalk G. J. Mol. Microbiol. Biotechnol. 7:204-211(2004) [PubMed: 15383718] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13 / ATCC 14580 [Goettingen].

[2]

"Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species." Rey M.W., Ramaiya P., Nelson B.A., Brody-Karpin S.D., Zaretsky E.J., Tang M., Lopez de Leon A., Xiang H., Gusti V., Clausen I.G., Olsen P.B., Rasmussen M.D., Andersen J.T., Joergensen P.L., Larsen T.S., Sorokin A., Bolotin A., Lapidus A. , Galleron N., Ehrlich S.D., Berka R.M. Genome Biol. 5:R77.1-R77.12(2004) [PubMed: 15461803] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13 / ATCC 14580 [Novozymes].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000002 Genomic DNA. Translation: AAU21687.1. AE017333 Genomic DNA. Translation: AAU39032.1.
RefSeq	YP_077325.1. NC_006270.3. YP_089725.1. NC_006322.1.
3D structure databases
ProteinModelPortal	Q65PI2.
SMR	Q65PI2. Positions 2-252.
ModBase	Search...
Protein-protein interaction databases
STRING	Q65PI2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBBACT00000054660; EBBACP00000053191; EBBACG00000054651. EBBACT00000062572; EBBACP00000061005; EBBACG00000062563.
GeneID	3028957. 3100284.
GenomeReviews	Gene locus BLi00052 in contig AE017333_GR. Gene locus BL00532 in contig CP000002_GR.
KEGG	bld:BLi00052. bli:BL00532.
NMPDR	fig|279010.5.peg.1334.
PATRIC	18945579. VBIBacLic203714_0043.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0084.
GeneTree	EBGT00050000002835.
HOGENOM	HBG629833.
OMA	LPLVIHT.
PhylomeDB	Q65PI2.
ProtClustDB	CLSK872601.
Family and domain databases
InterPro	IPR012278. DNase_TatD. IPR018228. DNase_TatD-rel_CS. IPR015991. DNase_TatD_bac-type. IPR001130. TatD_superfamily. [Graphical view]
KO	K03424.
PANTHER	PTHR10060. TatD_DNase. 1 hit.
Pfam	PF01026. TatD_DNase. 1 hit. [Graphical view]
PIRSF	PIRSF005902. DNase_TatD. 1 hit.
TIGRFAMs	TIGR00010. TIGR00010. 1 hit.
PROSITE	PS01137. TATD_1. 1 hit. PS01090. TATD_2. 1 hit. PS01091. TATD_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q65PI2_BACLD

Accession

Primary (citable) accession number: Q65PI2
Secondary accession number(s): Q62ZX1

Entry history

Integrated into UniProtKB/TrEMBL:	October 25, 2004
Last sequence update:	October 25, 2004
Last modified:	January 25, 2012
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)