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Q65KX8

- BGAL1_BACLD

UniProt

Q65KX8 - BGAL1_BACLD

Protein

Beta-galactosidase YesZ

Gene

yesZ

Organism
Bacillus licheniformis (strain DSM 13 / ATCC 14580)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 63 (01 Oct 2014)
      Sequence version 2 (24 Mar 2009)
      Previous versions | rss
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    Functioni

    May play a role in the degradation of rhamnogalacturonan derived from plant cell walls.By similarity

    Catalytic activityi

    Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei107 – 1071SubstrateBy similarity
    Metal bindingi111 – 1111ZincBy similarity
    Binding sitei145 – 1451SubstrateBy similarity
    Active sitei146 – 1461Proton donorBy similarity
    Metal bindingi154 – 1541ZincBy similarity
    Metal bindingi156 – 1561ZincBy similarity
    Metal bindingi159 – 1591ZincBy similarity
    Active sitei297 – 2971NucleophileBy similarity

    GO - Molecular functioni

    1. beta-galactosidase activity Source: UniProtKB-EC
    2. metal ion binding Source: UniProtKB-KW

    GO - Biological processi

    1. galactose metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Keywords - Ligandi

    Metal-binding, Zinc

    Enzyme and pathway databases

    BioCyciBLIC279010:GJ2P-1371-MONOMER.

    Protein family/group databases

    CAZyiGH42. Glycoside Hydrolase Family 42.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-galactosidase YesZ (EC:3.2.1.23)
    Short name:
    Beta-gal
    Alternative name(s):
    Probable rhamnogalacturonan beta-galactosidase
    Gene namesi
    Name:yesZ
    Ordered Locus Names:BLi01382, BL03780
    OrganismiBacillus licheniformis (strain DSM 13 / ATCC 14580)
    Taxonomic identifieri279010 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000000606: Chromosome, UP000000608: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. beta-galactosidase complex Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 663663Beta-galactosidase YesZPRO_0000367025Add
    BLAST

    Interactioni

    Subunit structurei

    Homotrimer.By similarity

    Protein-protein interaction databases

    STRINGi279010.BL03780.

    Structurei

    3D structure databases

    ProteinModelPortaliQ65KX8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni346 – 3494Substrate bindingBy similarity

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 42 family.Curated

    Phylogenomic databases

    eggNOGiCOG1874.
    HOGENOMiHOG000095202.
    KOiK01190.
    OrthoDBiEOG6HMX9F.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    3.40.50.880. 1 hit.
    InterProiIPR013739. Beta_galactosidase_C.
    IPR013738. Beta_galactosidase_Trimer.
    IPR029062. Class_I_gatase-like.
    IPR003476. Glyco_hydro_42.
    IPR013529. Glyco_hydro_42_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF02449. Glyco_hydro_42. 1 hit.
    PF08533. Glyco_hydro_42C. 1 hit.
    PF08532. Glyco_hydro_42M. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001084. B-galactosidase. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF52317. SSF52317. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q65KX8-1 [UniParc]FASTAAdd to Basket

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    MNGKLYHGAC FYPELWDEDV LDEDIRMMER IGINVVRIGE FAWSRMEPEK    50
    GRIDVGFFAD VIRKLRDNKI ETVMCTPTAT PPIWLTHGHP ERMHVNEKGE 100
    TMGHGSRQHA CTNHPYFRER ARLIIKHIAK EIGELPGLIG WQLDNEFKCH 150
    VAECICETCR TLWHKWLEDR YQTIDRLNEA WGTGVWSETY QCFEQVPQPG 200
    PTPFLHNSSL RTMYQLFSMD KISEFAREQA EVIRAYSDAP ITHNSSVMFG 250
    VDHEDLFKSL DFASFDTYAS QENSQAFLFN CDLWRNIKKG RPFWIMETSP 300
    SYSASLESYA APHQNGYLKA EAVSSYALGG AAFCYWLWRQ QRAGSEQPHG 350
    SVLSAWGEPD VGYENVLEAE RARREVEHIM LATAPLQAET AVVYSDRAKV 400
    FLKTEPHRGL HYRTLITEFY DRLLKMGIHR DVILEGSPLD GYKLLFTPFI 450
    HYLPPAFIKK AEAFAQSGGI WIAGPLTGGR TEHHTIHTDC GLGPLEKCSG 500
    VKTLFTFPMD ERNSSGTAFG VKAPLSLWSA VFEAGGTKAV GMIEKGPASG 550
    KAFITEHKCG KGKIVMLGSM PAGEAGDIMM KKLISHYAEE AGVEQKTDVT 600
    PGTVVAPRKG ADGLVWVVIN MDGKGGAVTL DGNGTDLLSG RPVTGRVTLG 650
    PHDYRVILLS ENK 663
    Length:663
    Mass (Da):74,214
    Last modified:March 24, 2009 - v2
    Checksum:iC2044F388107C6C6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017333 Genomic DNA. Translation: AAU40286.1.
    CP000002 Genomic DNA. Translation: AAU22933.1.
    RefSeqiWP_011197825.1. NC_006270.3.
    YP_006712760.1. NC_006322.1.
    YP_078571.1. NC_006270.3.

    Genome annotation databases

    EnsemblBacteriaiAAU22933; AAU22933; BL03780.
    AAU40286; AAU40286; BLi01382.
    GeneIDi3030421.
    3101523.
    KEGGibld:BLi01382.
    bli:BL03780.
    PATRICi18948341. VBIBacLic203714_1374.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017333 Genomic DNA. Translation: AAU40286.1 .
    CP000002 Genomic DNA. Translation: AAU22933.1 .
    RefSeqi WP_011197825.1. NC_006270.3.
    YP_006712760.1. NC_006322.1.
    YP_078571.1. NC_006270.3.

    3D structure databases

    ProteinModelPortali Q65KX8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 279010.BL03780.

    Protein family/group databases

    CAZyi GH42. Glycoside Hydrolase Family 42.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAU22933 ; AAU22933 ; BL03780 .
    AAU40286 ; AAU40286 ; BLi01382 .
    GeneIDi 3030421.
    3101523.
    KEGGi bld:BLi01382.
    bli:BL03780.
    PATRICi 18948341. VBIBacLic203714_1374.

    Phylogenomic databases

    eggNOGi COG1874.
    HOGENOMi HOG000095202.
    KOi K01190.
    OrthoDBi EOG6HMX9F.

    Enzyme and pathway databases

    BioCyci BLIC279010:GJ2P-1371-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    3.40.50.880. 1 hit.
    InterProi IPR013739. Beta_galactosidase_C.
    IPR013738. Beta_galactosidase_Trimer.
    IPR029062. Class_I_gatase-like.
    IPR003476. Glyco_hydro_42.
    IPR013529. Glyco_hydro_42_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF02449. Glyco_hydro_42. 1 hit.
    PF08533. Glyco_hydro_42C. 1 hit.
    PF08532. Glyco_hydro_42M. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001084. B-galactosidase. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF52317. SSF52317. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential."
      Veith B., Herzberg C., Steckel S., Feesche J., Maurer K.H., Ehrenreich P., Baeumer S., Henne A., Liesegang H., Merkl R., Ehrenreich A., Gottschalk G.
      J. Mol. Microbiol. Biotechnol. 7:204-211(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 13 / ATCC 14580.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 13 / ATCC 14580.

    Entry informationi

    Entry nameiBGAL1_BACLD
    AccessioniPrimary (citable) accession number: Q65KX8
    Secondary accession number(s): Q62WC5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 24, 2009
    Last sequence update: March 24, 2009
    Last modified: October 1, 2014
    This is version 63 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3