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Q65KL9

- Q65KL9_BACLD

UniProt

Q65KL9 - Q65KL9_BACLD

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

ykoU

Organism
Bacillus licheniformis (strain DSM 13 / ATCC 14580)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBLIC279010:GJ2P-1486-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Submitted name:
ATP-dependent DNA ligase YkoUImported (EC:6.5.1.1Imported)
Gene namesi
Name:ykoUImported
Ordered Locus Names:BL03626Imported, BLi01494Imported
OrganismiBacillus licheniformis (strain DSM 13 / ATCC 14580)Imported
Taxonomic identifieri279010 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000000606: Chromosome, UP000000608: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi279010.BL03626.

Structurei

3D structure databases

ProteinModelPortaliQ65KL9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000008893.
KOiK01971.
OMAiDWTIRSI.
OrthoDBiEOG661H49.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014145. LigD_pol.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q65KL9 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGITMQPVLT TSAPSGGNWR YEVKYDGYRG LLKIAATGEV SLISRNSQPL
60 70 80 90 100
ENTFPEISEF AKSMIETLKE HLPITIDGEI VSLTNRFRSR FEYVQKRGLS
110 120 130 140 150
KKAELIAQAA AKKPCQYLAF DLLVFNGESL TSLPYTERKR MLFDLMKELG
160 170 180 190 200
LPMAPDPMAH ARIQYIPDTS DFHDLWKAVK RFDGEGIVAK KKDSRWAENK
210 220 230 240 250
KTAEWLKLKN YKKAAVFMTG YNMANRYLTI AVYDRGQIKE VGSVSHGLGE
260 270 280 290 300
QERNAILSIV KQYGTETKPG EYTIDPSICM TVHYLTIHYG TLREVSFVSF
310 320 330 340 350
EFDMAWENCT YNRLLLHSRN VHPDLQLTSL DKVIFPKSDK TKADYIGYLN
360 370 380 390 400
EIGDFLLPFL DNRALTVIRY PHGSGGESFF QKNKPDYAPE FITSIRDDEH
410 420 430 440 450
EHIICSDYSV LLWLANQLAL EFHIPFQTVD TAHPTEIVFD LDPPSKSEFP
460 470 480 490 500
LAVRAAKELH RLFDQLGLLS FPKLSGNKGI QIYIPISKNA FTYEETRLFT
510 520 530 540 550
SFAASYCVSL FPDLFTTERL IKNRGGKLYI DYVQHAPGKT IICPYSTRGN
560 570 580 590 600
ELGTVAAPLF WDEVHSDLSP LNFTMEAVVK RTKELGCPFE SFFRQPQDKQ
610
IKAILDHLKE NNRSEN
Length:616
Mass (Da):70,285
Last modified:October 25, 2004 - v1
Checksum:iFD039A1032B1ABED
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000002 Genomic DNA. Translation: AAU23040.1.
AE017333 Genomic DNA. Translation: AAU40395.1.
RefSeqiYP_006712876.1. NC_006322.1.
YP_078678.1. NC_006270.3.

Genome annotation databases

EnsemblBacteriaiAAU23040; AAU23040; BL03626.
AAU40395; AAU40395; BLi01494.
GeneIDi3030566.
3098892.
KEGGibld:BLi01494.
bli:BL03626.
PATRICi18948571. VBIBacLic203714_1489.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000002 Genomic DNA. Translation: AAU23040.1 .
AE017333 Genomic DNA. Translation: AAU40395.1 .
RefSeqi YP_006712876.1. NC_006322.1.
YP_078678.1. NC_006270.3.

3D structure databases

ProteinModelPortali Q65KL9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 279010.BL03626.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAU23040 ; AAU23040 ; BL03626 .
AAU40395 ; AAU40395 ; BLi01494 .
GeneIDi 3030566.
3098892.
KEGGi bld:BLi01494.
bli:BL03626.
PATRICi 18948571. VBIBacLic203714_1489.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000008893.
KOi K01971.
OMAi DWTIRSI.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci BLIC279010:GJ2P-1486-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014145. LigD_pol.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 14580Imported and DSM 13 / ATCC 14580 [Goettingen].
  2. "The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential."
    Veith B., Herzberg C., Steckel S., Feesche J., Maurer K.H., Ehrenreich P., Baeumer S., Henne A., Liesegang H., Merkl R., Ehrenreich A., Gottschalk G.
    J. Mol. Microbiol. Biotechnol. 7:204-211(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 13Imported, DSM 13 / ATCC 14580 [Goettingen]Imported and DSM 13 / ATCC 14580 [Novozymes]Imported.
  3. Berka R.M., Rey M.W., Ramaiya P.
    Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 14580.
  4. Wiegand S., Hertel R., Dietrich S., Volland S., Liesegang H.
    Submitted (DEC-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DSM 13Imported.

Entry informationi

Entry nameiQ65KL9_BACLD
AccessioniPrimary (citable) accession number: Q65KL9
Secondary accession number(s): Q62W18
Entry historyi
Integrated into UniProtKB/TrEMBL: October 25, 2004
Last sequence update: October 25, 2004
Last modified: October 29, 2014
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3