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Q65KL9

- Q65KL9_BACLD

UniProt

Q65KL9 - Q65KL9_BACLD

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Protein
Submitted name: ATP-dependent DNA ligase
Gene
ykoU, BL03626, BLi01494
Organism
Bacillus licheniformis (strain DSM 13 / ATCC 14580)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBLIC279010:GJ2P-1486-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Submitted name:
ATP-dependent DNA ligase YkoUImported (EC:6.5.1.1Imported)
Gene namesi
Name:ykoUImported
Ordered Locus Names:BL03626Imported, BLi01494Imported
OrganismiBacillus licheniformis (strain DSM 13 / ATCC 14580)Imported
Taxonomic identifieri279010 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000000608: Chromosome, UP000000606: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi279010.BL03626.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000008893.
KOiK01971.
OMAiDWTIRSI.
OrthoDBiEOG661H49.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014145. LigD_pol.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q65KL9-1 [UniParc]FASTAAdd to Basket

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MGITMQPVLT TSAPSGGNWR YEVKYDGYRG LLKIAATGEV SLISRNSQPL    50
ENTFPEISEF AKSMIETLKE HLPITIDGEI VSLTNRFRSR FEYVQKRGLS 100
KKAELIAQAA AKKPCQYLAF DLLVFNGESL TSLPYTERKR MLFDLMKELG 150
LPMAPDPMAH ARIQYIPDTS DFHDLWKAVK RFDGEGIVAK KKDSRWAENK 200
KTAEWLKLKN YKKAAVFMTG YNMANRYLTI AVYDRGQIKE VGSVSHGLGE 250
QERNAILSIV KQYGTETKPG EYTIDPSICM TVHYLTIHYG TLREVSFVSF 300
EFDMAWENCT YNRLLLHSRN VHPDLQLTSL DKVIFPKSDK TKADYIGYLN 350
EIGDFLLPFL DNRALTVIRY PHGSGGESFF QKNKPDYAPE FITSIRDDEH 400
EHIICSDYSV LLWLANQLAL EFHIPFQTVD TAHPTEIVFD LDPPSKSEFP 450
LAVRAAKELH RLFDQLGLLS FPKLSGNKGI QIYIPISKNA FTYEETRLFT 500
SFAASYCVSL FPDLFTTERL IKNRGGKLYI DYVQHAPGKT IICPYSTRGN 550
ELGTVAAPLF WDEVHSDLSP LNFTMEAVVK RTKELGCPFE SFFRQPQDKQ 600
IKAILDHLKE NNRSEN 616
Length:616
Mass (Da):70,285
Last modified:October 25, 2004 - v1
Checksum:iFD039A1032B1ABED
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000002 Genomic DNA. Translation: AAU23040.1.
AE017333 Genomic DNA. Translation: AAU40395.1.
RefSeqiYP_006712876.1. NC_006322.1.
YP_078678.1. NC_006270.3.

Genome annotation databases

EnsemblBacteriaiAAU23040; AAU23040; BL03626.
AAU40395; AAU40395; BLi01494.
GeneIDi3030566.
3098892.
KEGGibld:BLi01494.
bli:BL03626.
PATRICi18948571. VBIBacLic203714_1489.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000002 Genomic DNA. Translation: AAU23040.1 .
AE017333 Genomic DNA. Translation: AAU40395.1 .
RefSeqi YP_006712876.1. NC_006322.1.
YP_078678.1. NC_006270.3.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 279010.BL03626.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAU23040 ; AAU23040 ; BL03626 .
AAU40395 ; AAU40395 ; BLi01494 .
GeneIDi 3030566.
3098892.
KEGGi bld:BLi01494.
bli:BL03626.
PATRICi 18948571. VBIBacLic203714_1489.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000008893.
KOi K01971.
OMAi DWTIRSI.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci BLIC279010:GJ2P-1486-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014145. LigD_pol.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 14580Imported and DSM 13 / ATCC 14580 [Novozymes].
  2. "The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential."
    Veith B., Herzberg C., Steckel S., Feesche J., Maurer K.H., Ehrenreich P., Baumer S., Henne A., Liesegang H., Merkl R., Ehrenreich A., Gottschalk G.
    J. Mol. Microbiol. Biotechnol. 7:204-211(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 13Imported and DSM 13 / ATCC 14580 [Goettingen].
  3. Berka R.M., Rey M.W., Ramaiya P.
    Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 14580.
  4. Wiegand S., Hertel R., Dietrich S., Volland S., Liesegang H.
    Submitted (DEC-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DSM 13Imported.

Entry informationi

Entry nameiQ65KL9_BACLD
AccessioniPrimary (citable) accession number: Q65KL9
Secondary accession number(s): Q62W18
Entry historyi
Integrated into UniProtKB/TrEMBL: October 25, 2004
Last sequence update: October 25, 2004
Last modified: July 9, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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