Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q65KL9

- Q65KL9_BACLD

UniProt

Q65KL9 - Q65KL9_BACLD

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

ykoU

Organism
Bacillus licheniformis (strain DSM 13 / ATCC 14580)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 75 (01 Oct 2014)
      Sequence version 1 (25 Oct 2004)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciBLIC279010:GJ2P-1486-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Submitted name:
    ATP-dependent DNA ligase YkoUImported (EC:6.5.1.1Imported)
    Gene namesi
    Name:ykoUImported
    Ordered Locus Names:BL03626Imported, BLi01494Imported
    OrganismiBacillus licheniformis (strain DSM 13 / ATCC 14580)Imported
    Taxonomic identifieri279010 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000000606: Chromosome, UP000000608: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi279010.BL03626.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000008893.
    KOiK01971.
    OMAiDWTIRSI.
    OrthoDBiEOG661H49.

    Family and domain databases

    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014145. LigD_pol.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q65KL9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGITMQPVLT TSAPSGGNWR YEVKYDGYRG LLKIAATGEV SLISRNSQPL    50
    ENTFPEISEF AKSMIETLKE HLPITIDGEI VSLTNRFRSR FEYVQKRGLS 100
    KKAELIAQAA AKKPCQYLAF DLLVFNGESL TSLPYTERKR MLFDLMKELG 150
    LPMAPDPMAH ARIQYIPDTS DFHDLWKAVK RFDGEGIVAK KKDSRWAENK 200
    KTAEWLKLKN YKKAAVFMTG YNMANRYLTI AVYDRGQIKE VGSVSHGLGE 250
    QERNAILSIV KQYGTETKPG EYTIDPSICM TVHYLTIHYG TLREVSFVSF 300
    EFDMAWENCT YNRLLLHSRN VHPDLQLTSL DKVIFPKSDK TKADYIGYLN 350
    EIGDFLLPFL DNRALTVIRY PHGSGGESFF QKNKPDYAPE FITSIRDDEH 400
    EHIICSDYSV LLWLANQLAL EFHIPFQTVD TAHPTEIVFD LDPPSKSEFP 450
    LAVRAAKELH RLFDQLGLLS FPKLSGNKGI QIYIPISKNA FTYEETRLFT 500
    SFAASYCVSL FPDLFTTERL IKNRGGKLYI DYVQHAPGKT IICPYSTRGN 550
    ELGTVAAPLF WDEVHSDLSP LNFTMEAVVK RTKELGCPFE SFFRQPQDKQ 600
    IKAILDHLKE NNRSEN 616
    Length:616
    Mass (Da):70,285
    Last modified:October 25, 2004 - v1
    Checksum:iFD039A1032B1ABED
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000002 Genomic DNA. Translation: AAU23040.1.
    AE017333 Genomic DNA. Translation: AAU40395.1.
    RefSeqiYP_006712876.1. NC_006322.1.
    YP_078678.1. NC_006270.3.

    Genome annotation databases

    EnsemblBacteriaiAAU23040; AAU23040; BL03626.
    AAU40395; AAU40395; BLi01494.
    GeneIDi3030566.
    3098892.
    KEGGibld:BLi01494.
    bli:BL03626.
    PATRICi18948571. VBIBacLic203714_1489.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000002 Genomic DNA. Translation: AAU23040.1 .
    AE017333 Genomic DNA. Translation: AAU40395.1 .
    RefSeqi YP_006712876.1. NC_006322.1.
    YP_078678.1. NC_006270.3.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 279010.BL03626.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAU23040 ; AAU23040 ; BL03626 .
    AAU40395 ; AAU40395 ; BLi01494 .
    GeneIDi 3030566.
    3098892.
    KEGGi bld:BLi01494.
    bli:BL03626.
    PATRICi 18948571. VBIBacLic203714_1489.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000008893.
    KOi K01971.
    OMAi DWTIRSI.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci BLIC279010:GJ2P-1486-MONOMER.

    Family and domain databases

    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014145. LigD_pol.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 14580Imported and DSM 13 / ATCC 14580 [Goettingen].
    2. "The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential."
      Veith B., Herzberg C., Steckel S., Feesche J., Maurer K.H., Ehrenreich P., Baeumer S., Henne A., Liesegang H., Merkl R., Ehrenreich A., Gottschalk G.
      J. Mol. Microbiol. Biotechnol. 7:204-211(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 13Imported, DSM 13 / ATCC 14580 [Goettingen]Imported and DSM 13 / ATCC 14580 [Novozymes]Imported.
    3. Berka R.M., Rey M.W., Ramaiya P.
      Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: ATCC 14580.
    4. Wiegand S., Hertel R., Dietrich S., Volland S., Liesegang H.
      Submitted (DEC-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DSM 13Imported.

    Entry informationi

    Entry nameiQ65KL9_BACLD
    AccessioniPrimary (citable) accession number: Q65KL9
    Secondary accession number(s): Q62W18
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 25, 2004
    Last sequence update: October 25, 2004
    Last modified: October 1, 2014
    This is version 75 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3