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Q65KH5 (Q65KH5_BACLD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 68. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Phage ATP-dependent DNA ligase LigB EMBL AAU40439.1
EC=6.5.1.1 EMBL AAU40439.1
Gene names
Name:ligB EMBL AAU40439.1
Ordered Locus Names:BL00865 EMBL AAU23083.1, BLi01538 EMBL AAU40439.1
OrganismBacillus licheniformis (strain DSM 13 / ATCC 14580) [Complete proteome] [HAMAP] EMBL AAU40439.1
Taxonomic identifier279010 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length269 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AAU40439.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q65KH5 [UniParc].

Last modified October 25, 2004. Version 1.
Checksum: 9C5C3CE4D8149CF5

FASTA26931,173
        10         20         30         40         50         60 
MFIWPMLLES AKEPFNSDDY ITETKFDGIR LIASRNNGLI RLYTRHNNEV TAKFPELLTL 

        70         80         90        100        110        120 
DIPDETILDG ELIVPGSTGA GDFEAVMERF QSRKSFYPIV FCVFDVLRIE GVSVTSKPLS 

       130        140        150        160        170        180 
ERKELLAGLK LDHPNVKIVE GVRGHATDYF ELVRENKIEG IVMKQANAPY AENKRSDRWL 

       190        200        210        220        230        240 
KIVNYEYTDV LISGLRKEDN ALLLSYLDGQ YAGIMEFMPY DARRKFHAER LIVEETEKYA 

       250        260 
YIEPIGCRVK HRFKTKNGLL RIPSFHEWR 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species."
Rey M.W., Ramaiya P., Nelson B.A., Brody-Karpin S.D., Zaretsky E.J., Tang M., Lopez de Leon A., Xiang H., Gusti V., Clausen I.G., Olsen P.B., Rasmussen M.D., Andersen J.T., Jorgensen P.L., Larsen T.S., Sorokin A., Bolotin A., Lapidus A. expand/collapse author list , Galleron N., Ehrlich S.D., Berka R.M.
Genome Biol. 5:R77.1-R77.12(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 14580 EMBL AAU23083.1 and DSM 13 / ATCC 14580 [Novozymes].
[2]"The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential."
Veith B., Herzberg C., Steckel S., Feesche J., Maurer K.H., Ehrenreich P., Baumer S., Henne A., Liesegang H., Merkl R., Ehrenreich A., Gottschalk G.
J. Mol. Microbiol. Biotechnol. 7:204-211(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13 EMBL AAU40439.1 and DSM 13 / ATCC 14580 [Goettingen].
[3]Berka R.M., Rey M.W., Ramaiya P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 14580.
[4]Wiegand S., Hertel R., Dietrich S., Volland S., Liesegang H.
Submitted (DEC-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 13 EMBL AAU40439.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000002 Genomic DNA. Translation: AAU23083.1.
AE017333 Genomic DNA. Translation: AAU40439.1.
RefSeqYP_006712920.1. NC_006322.1.
YP_078721.1. NC_006270.3.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING279010.BL00865.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAU23083; AAU23083; BL00865.
AAU40439; AAU40439; BLi01538.
GeneID3030620.
3099077.
KEGGbld:BLi01538.
bli:BL00865.
PATRIC18948659. VBIBacLic203714_1533.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000049932.
KOK01971.
OMALYTRHNN.
OrthoDBEOG6F2971.
ProtClustDBPRK07636.

Enzyme and pathway databases

BioCycBLIC279010:GJ2P-1529-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ65KH5_BACLD
AccessionPrimary (citable) accession number: Q65KH5
Secondary accession number(s): Q62VX5
Entry history
Integrated into UniProtKB/TrEMBL: October 25, 2004
Last sequence update: October 25, 2004
Last modified: April 16, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)