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Protein
Submitted name:

DNA ligase,phage related

Gene

ligB

Organism
Bacillus licheniformis (strain DSM 13 / ATCC 14580)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBLIC279010:GJ2P-1529-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase,phage relatedImported
Submitted name:
LigB proteinImported (EC:6.5.1.1Imported)
Gene namesi
Name:ligBImported
Ordered Locus Names:BL00865Imported, BLi01538Imported
OrganismiBacillus licheniformis (strain DSM 13 / ATCC 14580)Imported
Taxonomic identifieri279010 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000000608 Componenti: Chromosome UP000000606 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi279010.BL00865.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000049932.
KOiK10747.
OMAiLYTRHNN.
OrthoDBiEOG6F2971.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q65KH5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFIWPMLLES AKEPFNSDDY ITETKFDGIR LIASRNNGLI RLYTRHNNEV
60 70 80 90 100
TAKFPELLTL DIPDETILDG ELIVPGSTGA GDFEAVMERF QSRKSFYPIV
110 120 130 140 150
FCVFDVLRIE GVSVTSKPLS ERKELLAGLK LDHPNVKIVE GVRGHATDYF
160 170 180 190 200
ELVRENKIEG IVMKQANAPY AENKRSDRWL KIVNYEYTDV LISGLRKEDN
210 220 230 240 250
ALLLSYLDGQ YAGIMEFMPY DARRKFHAER LIVEETEKYA YIEPIGCRVK
260
HRFKTKNGLL RIPSFHEWR
Length:269
Mass (Da):31,173
Last modified:October 25, 2004 - v1
Checksum:i9C5C3CE4D8149CF5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000002 Genomic DNA. Translation: AAU23083.1.
AE017333 Genomic DNA. Translation: AAU40439.1.
RefSeqiYP_006712920.1. NC_006322.1.
YP_078721.1. NC_006270.3.

Genome annotation databases

EnsemblBacteriaiAAU23083; AAU23083; BL00865.
AAU40439; AAU40439; BLi01538.
KEGGibld:BLi01538.
bli:BL00865.
PATRICi18948659. VBIBacLic203714_1533.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000002 Genomic DNA. Translation: AAU23083.1.
AE017333 Genomic DNA. Translation: AAU40439.1.
RefSeqiYP_006712920.1. NC_006322.1.
YP_078721.1. NC_006270.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi279010.BL00865.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAU23083; AAU23083; BL00865.
AAU40439; AAU40439; BLi01538.
KEGGibld:BLi01538.
bli:BL00865.
PATRICi18948659. VBIBacLic203714_1533.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000049932.
KOiK10747.
OMAiLYTRHNN.
OrthoDBiEOG6F2971.

Enzyme and pathway databases

BioCyciBLIC279010:GJ2P-1529-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 14580Imported and DSM 13 / ATCC 14580 [Novozymes]Imported.
  2. "The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential."
    Veith B., Herzberg C., Steckel S., Feesche J., Maurer K.H., Ehrenreich P., Baumer S., Henne A., Liesegang H., Merkl R., Ehrenreich A., Gottschalk G.
    J. Mol. Microbiol. Biotechnol. 7:204-211(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 13Imported and DSM 13 / ATCC 14580 [Goettingen]Imported.
  3. Berka R.M., Rey M.W., Ramaiya P.
    Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 14580.
  4. Wiegand S., Hertel R., Dietrich S., Volland S., Liesegang H.
    Submitted (DEC-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DSM 13Imported.

Entry informationi

Entry nameiQ65KH5_BACLD
AccessioniPrimary (citable) accession number: Q65KH5
Secondary accession number(s): Q62VX5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 25, 2004
Last sequence update: October 25, 2004
Last modified: April 29, 2015
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.