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Q65JN9 (Q65JN9_BACLD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 82. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Succinyl-CoA ligase [ADP-forming] subunit alpha RuleBase RU000699

EC=6.2.1.5 RuleBase RU000699
Gene names
Name:sucD EMBL AAU40725.1
Ordered Locus Names:BL01284 EMBL AAU23365.1, BLi01830 EMBL AAU40725.1
OrganismBacillus licheniformis (strain DSM 13 / ATCC 14580) [Complete proteome] [HAMAP] EMBL AAU40725.1
Taxonomic identifier279010 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length300 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + succinate + CoA = ADP + phosphate + succinyl-CoA. RuleBase RU000699

Subunit structure

Heterotetramer of two alpha and two beta subunits By similarity. RuleBase RU000699

Sequence similarities

Belongs to the succinate/malate CoA ligase alpha subunit family. RuleBase RU000677

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site2471Tele-phosphohistidine intermediate By similarity PIRSR PIRSR001553-1

Sequences

Sequence LengthMass (Da)Tools
Q65JN9 [UniParc].

Last modified October 25, 2004. Version 1.
Checksum: 4FB078C4AC562D6A

FASTA30031,450
        10         20         30         40         50         60 
MSVFINKDTK VIVQGITGST ALFHTKQMLE YGTKIVGGVT PGKGGTEVEG VPVFNTVEEA 

        70         80         90        100        110        120 
VKQTGANASV IYVPAAFAAD AIMEATDAEL DLVICITEHI PVLDMVKVKR YMEGKKTRLI 

       130        140        150        160        170        180 
GPNCPGVITP EECKIGIMPG YIHKKGHVGV VSRSGTLTYE AVHQLSEAGV GQSTAVGIGG 

       190        200        210        220        230        240 
DPVNGTNFID VLKAFNEDPD THAVIMIGEI GGTAEEEAAE WVKANMTKPV VGFIGGKTAP 

       250        260        270        280        290        300 
PGKRMGHAGA IISGGKGTAD EKIKTMNACG IEVAETPSVM GETLIKVLKE KGLYETCKTH 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species."
Rey M.W., Ramaiya P., Nelson B.A., Brody-Karpin S.D., Zaretsky E.J., Tang M., Lopez de Leon A., Xiang H., Gusti V., Clausen I.G., Olsen P.B., Rasmussen M.D., Andersen J.T., Jorgensen P.L., Larsen T.S., Sorokin A., Bolotin A., Lapidus A. expand/collapse author list , Galleron N., Ehrlich S.D., Berka R.M.
Genome Biol. 5:R77.1-R77.12(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 14580 EMBL AAU23365.1 and DSM 13 / ATCC 14580 [Novozymes].
[2]"The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential."
Veith B., Herzberg C., Steckel S., Feesche J., Maurer K.H., Ehrenreich P., Baumer S., Henne A., Liesegang H., Merkl R., Ehrenreich A., Gottschalk G.
J. Mol. Microbiol. Biotechnol. 7:204-211(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13 EMBL AAU40725.1 and DSM 13 / ATCC 14580 [Goettingen].
[3]Berka R.M., Rey M.W., Ramaiya P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 14580.
[4]Wiegand S., Hertel R., Dietrich S., Volland S., Liesegang H.
Submitted (DEC-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 13 EMBL AAU40725.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000002 Genomic DNA. Translation: AAU23365.1.
AE017333 Genomic DNA. Translation: AAU40725.1.
RefSeqYP_006713206.1. NC_006322.1.
YP_079003.1. NC_006270.3.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING279010.BL01284.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAU23365; AAU23365; BL01284.
AAU40725; AAU40725; BLi01830.
GeneID3031001.
3098964.
KEGGbld:BLi01830.
bli:BL01284.
PATRIC18949259. VBIBacLic203714_1833.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0074.
HOGENOMHOG000239685.
KOK01902.
OMAHNSGPKA.
OrthoDBEOG644ZT0.
ProtClustDBPRK05678.

Enzyme and pathway databases

BioCycBLIC279010:GJ2P-1815-MONOMER.

Family and domain databases

Gene3D3.40.50.261. 1 hit.
3.40.50.720. 1 hit.
InterProIPR017440. Cit_synth/succinyl-CoA_lig_AS.
IPR003781. CoA-bd.
IPR005810. CoA_lig_alpha.
IPR005811. CoA_ligase.
IPR016040. NAD(P)-bd_dom.
IPR016102. Succinyl-CoA_synth-like.
[Graphical view]
PfamPF02629. CoA_binding. 1 hit.
PF00549. Ligase_CoA. 1 hit.
[Graphical view]
PIRSFPIRSF001553. SucCS_alpha. 1 hit.
PRINTSPR01798. SCOASYNTHASE.
SMARTSM00881. CoA_binding. 1 hit.
[Graphical view]
SUPFAMSSF52210. SSF52210. 1 hit.
TIGRFAMsTIGR01019. sucCoAalpha. 1 hit.
PROSITEPS01216. SUCCINYL_COA_LIG_1. 1 hit.
PS00399. SUCCINYL_COA_LIG_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ65JN9_BACLD
AccessionPrimary (citable) accession number: Q65JN9
Secondary accession number(s): Q62V44
Entry history
Integrated into UniProtKB/TrEMBL: October 25, 2004
Last sequence update: October 25, 2004
Last modified: April 16, 2014
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)