Q65JN9 (Q65JN9_BACLD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Succinyl-CoA ligase [ADP-forming] subunit alpha RuleBase RU000699
EC=6.2.1.5 RuleBase RU000699

Gene names

Name:	sucD EMBL AAU40725.1
Ordered Locus Names:	BL01284, BLi01830 EMBL AAU40725.1

Organism

Bacillus licheniformis (strain DSM 13 / ATCC 14580) [Complete proteome] [HAMAP] EMBL AAU40725.1

Taxonomic identifier

279010 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › Bacillus subtilis group › Bacillus licheniformis

Protein attributes

Sequence length	300 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + succinate + CoA = ADP + phosphate + succinyl-CoA. RuleBase RU000699
Subunit structure	Heterotetramer of two alpha and two beta subunits By similarity. RuleBase RU000699
Sequence similarities	Belongs to the succinate/malate CoA ligase alpha subunit family.

Ontologies

Keywords
Ligand	ATP-binding RuleBase RU000699 Nucleotide-binding
Molecular function	Ligase RuleBase RU000677 EMBL AAU40725.1
PTM	Phosphoprotein RuleBase RU000677
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATP citrate synthase activity Inferred from electronic annotation. Source: InterPro cofactor binding Inferred from electronic annotation. Source: InterPro succinate-CoA ligase (ADP-forming) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	247	1	Tele-phosphohistidine intermediate By similarity PIRSR PIRSR001553-1

Sequences

	Sequence		Length	Mass (Da)
	Q65JN9 [UniParc]. Last modified October 25, 2004. Version 1. Checksum: 4FB078C4AC562D6A	FASTA	300	31,450
	10 20 30 40 50 60 MSVFINKDTK VIVQGITGST ALFHTKQMLE YGTKIVGGVT PGKGGTEVEG VPVFNTVEEA 70 80 90 100 110 120 VKQTGANASV IYVPAAFAAD AIMEATDAEL DLVICITEHI PVLDMVKVKR YMEGKKTRLI 130 140 150 160 170 180 GPNCPGVITP EECKIGIMPG YIHKKGHVGV VSRSGTLTYE AVHQLSEAGV GQSTAVGIGG 190 200 210 220 230 240 DPVNGTNFID VLKAFNEDPD THAVIMIGEI GGTAEEEAAE WVKANMTKPV VGFIGGKTAP 250 260 270 280 290 300 PGKRMGHAGA IISGGKGTAD EKIKTMNACG IEVAETPSVM GETLIKVLKE KGLYETCKTH

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species." Rey M.W., Ramaiya P., Nelson B.A., Brody-Karpin S.D., Zaretsky E.J., Tang M., Lopez de Leon A., Xiang H., Gusti V., Clausen I.G., Olsen P.B., Rasmussen M.D., Andersen J.T., Joergensen P.L., Larsen T.S., Sorokin A., Bolotin A., Lapidus A. , Galleron N., Ehrlich S.D., Berka R.M. Genome Biol. 5:R77.1-R77.12(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13 / ATCC 14580 [Novozymes].
[2]	"The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential." Veith B., Herzberg C., Steckel S., Feesche J., Maurer K.H., Ehrenreich P., Baumer S., Henne A., Liesegang H., Merkl R., Ehrenreich A., Gottschalk G. J. Mol. Microbiol. Biotechnol. 7:204-211(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13 EMBL AAU40725.1 and DSM 13 / ATCC 14580 [Goettingen].
[3]	Wiegand S., Hertel R., Dietrich S., Volland S., Liesegang H. Submitted (DEC-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: DSM 13 EMBL AAU40725.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000002 Genomic DNA. Translation: AAU23365.1. AE017333 Genomic DNA. Translation: AAU40725.1.
RefSeq	YP_006713206.1. NC_006322.1. YP_079003.1. NC_006270.3.
3D structure databases
SMR	Q65JN9. Positions 2-289.
ModBase	Search...
Protein-protein interaction databases
STRING	279010.BL01284.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAU23365; AAU23365; BL01284. AAU40725; AAU40725; BLi01830.
GeneID	3031001. 3098964.
KEGG	bld:BLi01830. bli:BL01284.
PATRIC	18949259. VBIBacLic203714_1833.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0074.
HOGENOM	HOG000239685.
KO	K01902.
OMA	KGRKKPM.
ProtClustDB	PRK05678.
Enzyme and pathway databases
BioCyc	BLIC279010:GJ2P-1815-MONOMER.
Family and domain databases
Gene3D	3.40.50.261. 1 hit. 3.40.50.720. 1 hit.
InterPro	IPR017440. Cit_synth/succinyl-CoA_lig_AS. IPR003781. CoA-bd. IPR005810. CoA_lig_alpha. IPR005811. CoA_ligase. IPR016040. NAD(P)-bd_dom. IPR016102. Succinyl-CoA_synth-like. [Graphical view]
Pfam	PF02629. CoA_binding. 1 hit. PF00549. Ligase_CoA. 1 hit. [Graphical view]
PIRSF	PIRSF001553. SucCS_alpha. 1 hit.
PRINTS	PR01798. SCOASYNTHASE.
SMART	SM00881. CoA_binding. 1 hit. [Graphical view]
SUPFAM	SSF52210. CoA_ligase. 1 hit.
TIGRFAMs	TIGR01019. sucCoAalpha. 1 hit.
PROSITE	PS01216. SUCCINYL_COA_LIG_1. 1 hit. PS00399. SUCCINYL_COA_LIG_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q65JN9_BACLD

Accession

Primary (citable) accession number: Q65JN9
Secondary accession number(s): Q62V44

Entry history

Integrated into UniProtKB/TrEMBL:	October 25, 2004
Last sequence update:	October 25, 2004
Last modified:	May 1, 2013
This is version 75 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)