Q65I09 (Q65I09_BACLD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
30S ribosomal protein S1-like protein EMBL AAU41305.1

Submitted name:
Nucleic acid-binding protein EMBL AAU23952.1

Gene names

Name:	ypfD EMBL AAU41305.1
Ordered Locus Names:	BL02218, BLi02427 EMBL AAU41305.1

Organism

Bacillus licheniformis (strain DSM 13 / ATCC 14580) [Complete proteome] [HAMAP] EMBL AAU41305.1

Taxonomic identifier

279010 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › Bacillus subtilis group › Bacillus licheniformis

Protein attributes

Sequence length	382 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein EMBL AAU41305.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q65I09 [UniParc]. Last modified October 25, 2004. Version 1. Checksum: 07B524E5B9565E2E	FASTA	382	42,587
	10 20 30 40 50 60 MTEEMNQIDV QVPEVGDVVK GIVTKVEDKH VDVDIPNCKQ TGIIPISELS SLHVEKASDV 70 80 90 100 110 120 VNVDDELELK VTKVEDDALI LSKRAVDADR AWEDLEKKFE SKEVFEAEVK DVVKGGLVVD 130 140 150 160 170 180 IGVRGFIPAS LVEAHFVEDF TDYKGKTLTL IVVELDRDKN RVILSHRAVV EKEQSERKQE 190 200 210 220 230 240 FLQTLEAGQV LEGKVQRLTD FGAFVDIGGI DGLVHISQLS HSHVEKPSDV VEEGQDVKVK 250 260 270 280 290 300 VLSVDRDNER ISLSIKETLP GPWSNIGEKV KPGDVLDGKV QRLVSFGAFV EVLPGVEGLV 310 320 330 340 350 360 HISQISNKHI GTPHEVLEEG QDVKVKVLDV NEEEERISLS MKELEENTDK AEQEDYRQYQ 370 380 AKEESSGFQL GEMIGDKLNK LK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species." Rey M.W., Ramaiya P., Nelson B.A., Brody-Karpin S.D., Zaretsky E.J., Tang M., Lopez de Leon A., Xiang H., Gusti V., Clausen I.G., Olsen P.B., Rasmussen M.D., Andersen J.T., Joergensen P.L., Larsen T.S., Sorokin A., Bolotin A., Lapidus A. , Galleron N., Ehrlich S.D., Berka R.M. Genome Biol. 5:R77.1-R77.12(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13 / ATCC 14580 [Novozymes].
[2]	"The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential." Veith B., Herzberg C., Steckel S., Feesche J., Maurer K.H., Ehrenreich P., Baumer S., Henne A., Liesegang H., Merkl R., Ehrenreich A., Gottschalk G. J. Mol. Microbiol. Biotechnol. 7:204-211(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13 EMBL AAU41305.1 and DSM 13 / ATCC 14580 [Goettingen].
[3]	Wiegand S., Hertel R., Dietrich S., Volland S., Liesegang H. Submitted (DEC-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: DSM 13 EMBL AAU41305.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000002 Genomic DNA. Translation: AAU23952.1. AE017333 Genomic DNA. Translation: AAU41305.1.
RefSeq	YP_006713787.1. NC_006322.1. YP_079590.1. NC_006270.3.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	279010.BL02218.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAU23952; AAU23952; BL02218. AAU41305; AAU41305; BLi02427.
GeneID	3028141. 3097699.
KEGG	bld:BLi02427. bli:BL02218.
PATRIC	18950514. VBIBacLic203714_2459.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0539.
HOGENOM	HOG000044053.
KO	K02945.
OMA	WQQFART.
ProtClustDB	PRK06676.
Enzyme and pathway databases
BioCyc	BLIC279010:GJ2P-2414-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 4 hits.
InterPro	IPR012340. NA-bd_OB-fold. IPR003029. Rbsml_prot_S1_RNA-bd_dom. IPR000110. Ribosomal_S1. IPR022967. RNA-binding_domain_S1. [Graphical view]
Pfam	PF00575. S1. 4 hits. [Graphical view]
PIRSF	PIRSF002111. RpsA. 1 hit.
PRINTS	PR00681. RIBOSOMALS1.
SMART	SM00316. S1. 4 hits. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 4 hits.
PROSITE	PS50126. S1. 4 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q65I09_BACLD

Accession

Primary (citable) accession number: Q65I09
Secondary accession number(s): Q62TF7

Entry history

Integrated into UniProtKB/TrEMBL:	October 25, 2004
Last sequence update:	October 25, 2004
Last modified:	May 1, 2013
This is version 64 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)