Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q65GU1 (Q65GU1_BACLD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Cystathionine gamma-lyase YrhB EMBL AAU24359.1
Submitted name:
YrhB EMBL AAU41723.1
Gene names
Name:yrhB EMBL AAU41723.1
Ordered Locus Names:BL02018, BLi02853
OrganismBacillus licheniformis (strain DSM 13 / ATCC 14580) [Complete proteome] [HAMAP]
Taxonomic identifier279010 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length380 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU004507

Sequence similarities

Belongs to the trans-sulfuration enzymes family. RuleBase RU004079

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU004507
   Molecular functionLyase EMBL AAU24359.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcellular amino acid metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionlyase activity

Inferred from electronic annotation. Source: UniProtKB-KW

pyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q65GU1 [UniParc].

Last modified October 25, 2004. Version 1.
Checksum: B3882743F73C96FC

FASTA38041,120
        10         20         30         40         50         60 
MKPKTKMIHG GITGDEKTGA VSVPIYQVST YKQPRAGQHT GYEYSRTGNP TRTALESLIA 

        70         80         90        100        110        120 
DVEGGAAGYA FGSGMAAITA VMMLFKSGDH IVLTDDVYGG TYRVMTKVLN RIGIEATFSD 

       130        140        150        160        170        180 
TSSIEDIEKA IKPNTKAIYV ETPTNPLLKI TDIKKTAETA KKHDLLLIVD NTFYTPYFQN 

       190        200        210        220        230        240 
PISLGADIVL HSATKYLGGH SDVVGGLVVA ASKELAEEIH FIQNSTGGIL GPQDSWLLMR 

       250        260        270        280        290        300 
GMKTLGLRME AHEQNARKIA AFLDDHPAVK KVYYPGLPSH PGHELAKRQS TGFGGMISFD 

       310        320        330        340        350        360 
IGKEENVDLV LGRLKWFTIA ESLGAVESLI SVPARMTHAS IPPERRLELG ITDGLIRISA 

       370        380 
GVEDIDDLLE DLQQALAPLS

« Hide

References

[1]"The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential."
Veith B., Herzberg C., Steckel S., Feesche J., Maurer K.H., Ehrenreich P., Baeumer S., Henne A., Liesegang H., Merkl R., Ehrenreich A., Gottschalk G.
J. Mol. Microbiol. Biotechnol. 7:204-211(2004) [PubMed: 15383718] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13 / ATCC 14580 [Goettingen].
[2]"Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species."
Rey M.W., Ramaiya P., Nelson B.A., Brody-Karpin S.D., Zaretsky E.J., Tang M., Lopez de Leon A., Xiang H., Gusti V., Clausen I.G., Olsen P.B., Rasmussen M.D., Andersen J.T., Joergensen P.L., Larsen T.S., Sorokin A., Bolotin A., Lapidus A. expand/collapse author list , Galleron N., Ehrlich S.D., Berka R.M.
Genome Biol. 5:R77.1-R77.12(2004) [PubMed: 15461803] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13 / ATCC 14580 [Novozymes].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000002 Genomic DNA. Translation: AAU24359.1.
AE017333 Genomic DNA. Translation: AAU41723.1.
RefSeqYP_079997.1. NC_006270.3.
YP_092416.1. NC_006322.1.

3D structure databases

ProteinModelPortalQ65GU1.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ65GU1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBBACT00000055186; EBBACP00000053717; EBBACG00000055177.
EBBACT00000060573; EBBACP00000059006; EBBACG00000060564.
GeneID3027783.
3098110.
GenomeReviewsGene locus BLi02853 in contig AE017333_GR.
Gene locus BL02018 in contig CP000002_GR.
KEGGbld:BLi02853.
bli:BL02018.
NMPDRfig|279010.5.peg.3144.
PATRIC18951418. VBIBacLic203714_2910.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0626.
GeneTreeEBGT00070000031827.
HOGENOMHBG754729.
OMANQYEYSR.
PhylomeDBQ65GU1.
ProtClustDBPRK07671.

Family and domain databases

InterProIPR000277. Cys/Met-Metab_PyrdxlP-dep_enz.
IPR015424. PyrdxlP-dep_Trfase_major_dom.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
Gene3DG3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit.
G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KOK01760.
PANTHERPTHR11808. Cys_Met_Meta_PP. 1 hit.
PfamPF01053. Cys_Met_Meta_PP. 1 hit.
[Graphical view]
PIRSFPIRSF001434. CGS. 1 hit.
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITEPS00868. CYS_MET_METAB_PP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ65GU1_BACLD
AccessionPrimary (citable) accession number: Q65GU1
Secondary accession number(s): Q62SA0
Entry history
Integrated into UniProtKB/TrEMBL: October 25, 2004
Last sequence update: October 25, 2004
Last modified: December 14, 2011
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info