Q65DH8 (Q65DH8_BACLD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcriptional regulator (IclR family) EMBL AAU25514.1

Gene names

Ordered Locus Names:

BL03848, BLi04073

Organism

Bacillus licheniformis (strain DSM 13 / ATCC 14580) [Complete proteome] [HAMAP]

Taxonomic identifier

279010 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length	252 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH iclR-type DNA-binding domain. RuleBase RU000705

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000705
Ligand	DNA-binding RuleBase RU000705
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q65DH8 [UniParc]. Last modified October 25, 2004. Version 1. Checksum: 7DB8C1CF3852348A	FASTA	252	27,843
	10 20 30 40 50 60 MSVKSAVRVV RIFELLSNHP DGLTVKEISK ELSLPQSSTF NLAATLLDEG YLQQDAVKRY 70 80 90 100 110 120 RLGAKLIQVG TAAMESIDIS SQGVPFLKQL MDGVQETVFM AVLSDDQLVY IAKIDNNRSI 130 140 150 160 170 180 RTTAQPGSRK PLYCTGLGKA FLAFMPEDKR EGLLDRMEFI RFTGHTITAR EELEKQLQTF 190 200 210 220 230 240 LEQGYAVDNE ENEEGLFCLA APVYGPDGVM KAAISTAGPK ERMLARKAVI VEQLLHTAGK 250 ITESIGGYRK PL

References

[1]

"The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential." Veith B., Herzberg C., Steckel S., Feesche J., Maurer K.H., Ehrenreich P., Baeumer S., Henne A., Liesegang H., Merkl R., Ehrenreich A., Gottschalk G. J. Mol. Microbiol. Biotechnol. 7:204-211(2004) [PubMed: 15383718] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13 / ATCC 14580 [Goettingen].

[2]

"Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species." Rey M.W., Ramaiya P., Nelson B.A., Brody-Karpin S.D., Zaretsky E.J., Tang M., Lopez de Leon A., Xiang H., Gusti V., Clausen I.G., Olsen P.B., Rasmussen M.D., Andersen J.T., Joergensen P.L., Larsen T.S., Sorokin A., Bolotin A., Lapidus A. , Galleron N., Ehrlich S.D., Berka R.M. Genome Biol. 5:R77.1-R77.12(2004) [PubMed: 15461803] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13 / ATCC 14580 [Novozymes].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000002 Genomic DNA. Translation: AAU25514.1. AE017333 Genomic DNA. Translation: AAU42886.1.
RefSeq	YP_081152.1. NC_006270.3. YP_093579.1. NC_006322.1.
3D structure databases
ProteinModelPortal	Q65DH8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q65DH8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBBACT00000057892; EBBACP00000056423; EBBACG00000057883. EBBACT00000059180; EBBACP00000057613; EBBACG00000059171.
GeneID	3029441. 3101302.
GenomeReviews	Gene locus BLi04073 in contig AE017333_GR. Gene locus BL03848 in contig CP000002_GR.
KEGG	bld:BLi04073. bli:BL03848.
NMPDR	fig|279010.5.peg.3288.
PATRIC	18953960. VBIBacLic203714_4155.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1414.
GeneTree	EBGT00050000002498.
HOGENOM	HBG739407.
OMA	AGPKERM.
ProtClustDB	CLSK249146.
Family and domain databases
InterPro	IPR014757. Tscrpt_reg_IclR_C. IPR005471. Tscrpt_reg_IclR_N. IPR011991. WHTH_trsnscrt_rep_DNA-bd. [Graphical view]
Gene3D	G3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
Pfam	PF09339. HTH_IclR. 1 hit. PF01614. IclR. 1 hit. [Graphical view]
SMART	SM00346. HTH_ICLR. 1 hit. [Graphical view]
PROSITE	PS51077. HTH_ICLR. 1 hit. PS51078. ICLR_ED. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q65DH8_BACLD

Accession

Primary (citable) accession number: Q65DH8
Secondary accession number(s): Q62NZ7

Entry history

Integrated into UniProtKB/TrEMBL:	October 25, 2004
Last sequence update:	October 25, 2004
Last modified:	December 14, 2011
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)