Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q65DC0 (Q65DC0_BACLD) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 90. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names

ABC transporter ATP-binding protein/permease CydD EMBL AAU42944.1
Gene names
Name:cydD EMBL AAU42944.1
Ordered Locus Names:BL00926 EMBL AAU25570.1, BLi04131 EMBL AAU42944.1
OrganismBacillus licheniformis (strain DSM 13 / ATCC 14580) [Complete proteome] [HAMAP] EMBL AAU42944.1
Taxonomic identifier279010 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length582 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ABC transporter superfamily. RuleBase RU000684

Sequences

Sequence LengthMass (Da)Tools
Q65DC0 [UniParc].

Last modified October 25, 2004. Version 1.
Checksum: B08139EEF7A40887

FASTA58264,679
        10         20         30         40         50         60 
MNNEDGWILP YIKKNTRLLI IVVLLGGLTA CSAAALMFTS GYLISKAATR PENVLMIYVP 

        70         80         90        100        110        120 
IVAVRTFGIL RSVSRYVERL TGHHIILKIL SDMRVRLYRM LEPQALKWRE RFRTGDMLGI 

       130        140        150        160        170        180 
LADDVEHLQD MYLRTVFPGL SALLLYGVFI AAIGFFSWPF AGLMAVYAAV FVFLVPLVSL 

       190        200        210        220        230        240 
LVTRAKNVAL KRGRSHLYRQ LTDAVMGVSD WVFSGRQNDF VHSYEAAEHE WLAIEKKQVR 

       250        260        270        280        290        300 
FSRWRDFAMQ CLAAGLVLLM LIWAGGQSAE GALAPVFIAA FVLVVFPLTE AFFPLSDAAA 

       310        320        330        340        350        360 
SIPEYQDSLE RMDGLQPPKR GNGADVQQER AEAVGLDDVT LRFEDVSFSY EQGQPVLDGV 

       370        380        390        400        410        420 
SFILKQGEKT ALLGPSGAGK STILSLIQGA LAPSKGNITL NDISVQSLQG EISRVVSVFN 

       430        440        450        460        470        480 
QQPHLFDTTV LNNIRLGNPD ASDEDVYWAA RQVKLHDYIQ SLPDGYHTSV QETGIRFSGG 

       490        500        510        520        530        540 
ERQRIALARI LLQDAPIVVL DEPTVGLDPK TEKELLSTMF QVLDGKTVLW ITHHLAGAEA 

       550        560        570        580 
ADRILFLDKG KLAMAGSHQQ LLENNPRYSR LYRLDAPVSR LF 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species."
Rey M.W., Ramaiya P., Nelson B.A., Brody-Karpin S.D., Zaretsky E.J., Tang M., Lopez de Leon A., Xiang H., Gusti V., Clausen I.G., Olsen P.B., Rasmussen M.D., Andersen J.T., Jorgensen P.L., Larsen T.S., Sorokin A., Bolotin A., Lapidus A. expand/collapse author list , Galleron N., Ehrlich S.D., Berka R.M.
Genome Biol. 5:R77.1-R77.12(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 14580 EMBL AAU25570.1 and DSM 13 / ATCC 14580 [Novozymes].
[2]"The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential."
Veith B., Herzberg C., Steckel S., Feesche J., Maurer K.H., Ehrenreich P., Baumer S., Henne A., Liesegang H., Merkl R., Ehrenreich A., Gottschalk G.
J. Mol. Microbiol. Biotechnol. 7:204-211(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13 EMBL AAU42944.1 and DSM 13 / ATCC 14580 [Goettingen].
[3]Berka R.M., Rey M.W., Ramaiya P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 14580.
[4]Wiegand S., Hertel R., Dietrich S., Volland S., Liesegang H.
Submitted (DEC-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 13 EMBL AAU42944.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000002 Genomic DNA. Translation: AAU25570.1.
AE017333 Genomic DNA. Translation: AAU42944.1.
RefSeqYP_006715404.1. NC_006322.1.
YP_081208.1. NC_006270.3.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING279010.BL00926.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAU25570; AAU25570; BL00926.
AAU42944; AAU42944; BLi04131.
GeneID3027448.
3097418.
KEGGbld:BLi04131.
bli:BL00926.
PATRIC18954080. VBIBacLic203714_4215.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4987.
KOK16012.
OMAWITHHLA.
OrthoDBEOG6T7N3V.

Enzyme and pathway databases

BioCycBLIC279010:GJ2P-4085-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
InterProIPR003593. AAA+_ATPase.
IPR011527. ABC1_TM_dom.
IPR014223. ABC_CydC.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR001140. ABC_transptr_TM_dom.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamPF00664. ABC_membrane. 1 hit.
PF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 1 hit.
SSF90123. SSF90123. 2 hits.
TIGRFAMsTIGR02868. CydC. 1 hit.
PROSITEPS50929. ABC_TM1F. 1 hit.
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ65DC0_BACLD
AccessionPrimary (citable) accession number: Q65DC0
Secondary accession number(s): Q62NU1
Entry history
Integrated into UniProtKB/TrEMBL: October 25, 2004
Last sequence update: October 25, 2004
Last modified: July 9, 2014
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)