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Q65D31 (Q65D31_BACLD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycoside hydrolase, family 43 YxiA EMBL AAU25654.2
Submitted name:
YxiA EMBL AAU43033.1
Gene names
Name:yxiA EMBL AAU43033.1
Ordered Locus Names:BL00219, BLi04220
OrganismBacillus licheniformis (strain DSM 13 / ATCC 14580) [Complete proteome] [HAMAP]
Taxonomic identifier279010 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length475 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding3081Calcium PDB 3LV4
Metal binding3851Calcium PDB 3LV4
Metal binding4021Calcium PDB 3LV4

Sequences

Sequence LengthMass (Da)Tools
Q65D31 [UniParc].

Last modified October 25, 2004. Version 1.
Checksum: 277F7BB397CCCD4D

FASTA47553,064
        10         20         30         40         50         60 
MNMRKCFIQV LALLFIIAAC FAPNQASAQT QKPVFSEVTV HDPSIIKANG TYYVFGSHLA 

        70         80         90        100        110        120 
SAKSTDLMNW TQISSSVHDG NPLIPNVYEE LKETFEWAES DTLWAPDVTQ LEDGKFYMYY 

       130        140        150        160        170        180 
NACRGDSPRS ALGLAVADDI EGPYKNKGIF LKSGMDGISN DGTPYDATKH PNVVDPHTFF 

       190        200        210        220        230        240 
DQNGKLWMVY GSYSGGIFIL EMDKKTGFPL PGQGYGKKLI GGNHSRIEGA YILYHPETQY 

       250        260        270        280        290        300 
YYLYMSFGGL AADGGYNIRV ARSKNPDGPY YDAEGHAMID VRGKEGTLFD DRSIEPYGVK 

       310        320        330        340        350        360 
LMGNFSFNNK NGYVSPGHNS AFYDEKSGKS YLIFHTRFPG RGEEHEVRVH QLLMNKQGWP 

       370        380        390        400        410        420 
VVAPHRYAGE KLEKVKKSDV IGDYELVRHG KDISADIKES KEIRLNQNGK ITGAVAGTWK 

       430        440        450        460        470 
NTGHNKIELK IDGKTYDGVF LRQWDAASER KVMTFSALSR EGDAVWGSSL KRAEF

« Hide

References

« Hide 'large scale' references
[1]"The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential."
Veith B., Herzberg C., Steckel S., Feesche J., Maurer K.H., Ehrenreich P., Baeumer S., Henne A., Liesegang H., Merkl R., Ehrenreich A., Gottschalk G.
J. Mol. Microbiol. Biotechnol. 7:204-211(2004) [PubMed: 15383718] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13 / ATCC 14580 [Goettingen].
[2]"Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species."
Rey M.W., Ramaiya P., Nelson B.A., Brody-Karpin S.D., Zaretsky E.J., Tang M., Lopez de Leon A., Xiang H., Gusti V., Clausen I.G., Olsen P.B., Rasmussen M.D., Andersen J.T., Joergensen P.L., Larsen T.S., Sorokin A., Bolotin A., Lapidus A. expand/collapse author list , Galleron N., Ehrlich S.D., Berka R.M.
Genome Biol. 5:R77.1-R77.12(2004) [PubMed: 15461803] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 13 / ATCC 14580 [Novozymes].
[3]"Crystal structure of the glycoside hydrolase, family 43 YxiA protein from Bacillus licheniformis."
Vorobiev S., Abashidze M., Seetharaman J., Belote RL., Ciccosanti C., Sahdev S., Xiao R., Acton T.B., Everett J.K., Montelione G.T., Tong L., Hunt J.F.
Submitted (FEB-2010) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS) OF 29-475 IN COMPLEX WITH CALCIUM.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000002 Genomic DNA. Translation: AAU25654.2.
AE017333 Genomic DNA. Translation: AAU43033.1.
RefSeqYP_081292.2. NC_006270.3.
YP_093726.1. NC_006322.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3LV4X-ray1.70A/B29-475[»]
ProteinModelPortalQ65D31.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ65D31.

Protein family/group databases

CAZyGH43. Glycoside Hydrolase Family 43.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBBACT00000054788; EBBACP00000053319; EBBACG00000054779.
EBBACT00000058797; EBBACP00000057230; EBBACG00000058788.
GeneID3029028.
3101088.
GenomeReviewsGene locus BLi04220 in contig AE017333_GR.
Gene locus BL00219 in contig CP000002_GR.
KEGGbld:BLi04220.
bli:BL00219.
NMPDRfig|279010.5.peg.3742.
PATRIC18954266. VBIBacLic203714_4308.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3507.
GeneTreeEBGT00050000001042.
HOGENOMHBG338482.
OMANGTYYVF.
ProtClustDBCLSK888149.

Family and domain databases

InterProIPR006710. Glyco_hydro_43.
IPR023296. Glyco_hydro_43_beta-prop.
[Graphical view]
Gene3DG3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
PANTHERPTHR22925. Glyco_hydro_43. 1 hit.
PfamPF04616. Glyco_hydro_43. 1 hit.
[Graphical view]
SUPFAMSSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ65D31_BACLD
AccessionPrimary (citable) accession number: Q65D31
Secondary accession number(s): Q62NK7
Entry history
Integrated into UniProtKB/TrEMBL: October 25, 2004
Last sequence update: October 25, 2004
Last modified: December 14, 2011
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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