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Protein
Submitted name:

Microtubule-associated protein 1 light chain 3 beta, isoform CRA_c

Gene

DKFZp762B153

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

AutophagyUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Microtubule-associated protein 1 light chain 3 beta, isoform CRA_cImported
Submitted name:
Putative uncharacterized protein DKFZp762B153Imported
Submitted name:
cDNA FLJ77661, highly similar to Homo sapiens microtubule-associated protein 1 light chain 3 beta(MAP1LC3B), mRNAImported
Gene namesi
Name:DKFZp762B153Imported
Synonyms:MAP1LC3BImported
ORF Names:hCG_32374Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA134923100.

Expressioni

Gene expression databases

BgeeiENSG00000140941.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000268607.

Structurei

3D structure databases

SMRiQ658J6. Positions 1-122.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ATG8 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG1654. Eukaryota.
ENOG4111JAT. LUCA.
HOVERGENiHBG051706.
KOiK10435.
OMAiQQEADQD.
OrthoDBiEOG091G18ST.
PhylomeDBiQ658J6.

Family and domain databases

CDDicd01611. GABARAP. 1 hit.
InterProiIPR004241. Atg8-like.
IPR029071. Ubiquitin-rel_dom.
[Graphical view]
PANTHERiPTHR10969. PTHR10969. 1 hit.
PfamiPF02991. Atg8. 1 hit.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.

Sequencei

Sequence statusi: Complete.

Q658J6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSEKTFKQR RTFEQRVEDV RLIREQHPTK IPVIIERYKG EKQLPVLDKT
60 70 80 90 100
KFLVPDHVNM SELIKIIRRR LQLNANQAFF LLVNGHSMVS VSTPISEVYE
110 120
SEKDEDGFLY MVYASQETFG MKLSV
Length:125
Mass (Da):14,688
Last modified:May 10, 2005 - v1
Checksum:iBB141DEC7653E83F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK290956 mRNA. Translation: BAF83645.1.
AL834298 mRNA. Translation: CAD38970.1.
CH471114 Genomic DNA. Translation: EAW95394.1.
CH471114 Genomic DNA. Translation: EAW95398.1.
RefSeqiNP_073729.1. NM_022818.4.
UniGeneiHs.356061.

Genome annotation databases

GeneIDi81631.
KEGGihsa:81631.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK290956 mRNA. Translation: BAF83645.1.
AL834298 mRNA. Translation: CAD38970.1.
CH471114 Genomic DNA. Translation: EAW95394.1.
CH471114 Genomic DNA. Translation: EAW95398.1.
RefSeqiNP_073729.1. NM_022818.4.
UniGeneiHs.356061.

3D structure databases

SMRiQ658J6. Positions 1-122.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000268607.

Protocols and materials databases

DNASUi81631.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi81631.
KEGGihsa:81631.

Organism-specific databases

CTDi81631.
PharmGKBiPA134923100.

Phylogenomic databases

eggNOGiKOG1654. Eukaryota.
ENOG4111JAT. LUCA.
HOVERGENiHBG051706.
KOiK10435.
OMAiQQEADQD.
OrthoDBiEOG091G18ST.
PhylomeDBiQ658J6.

Miscellaneous databases

ChiTaRSiMAP1LC3B. human.
GenomeRNAii81631.

Gene expression databases

BgeeiENSG00000140941.

Family and domain databases

CDDicd01611. GABARAP. 1 hit.
InterProiIPR004241. Atg8-like.
IPR029071. Ubiquitin-rel_dom.
[Graphical view]
PANTHERiPTHR10969. PTHR10969. 1 hit.
PfamiPF02991. Atg8. 1 hit.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ658J6_HUMAN
AccessioniPrimary (citable) accession number: Q658J6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: September 7, 2016
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.