Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q654U4 (GUN16_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Endoglucanase 16

EC=3.2.1.4
Alternative name(s):
Endo-1,4-beta glucanase 16
Gene names
Ordered Locus Names:Os06g0247900, LOC_Os06g13830
ORF Names:OJ1136_C11.27
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length538 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

Subcellular location

Secreted By similarity.

Sequence similarities

Belongs to the glycosyl hydrolase 9 (cellulase E) family.

Sequence caution

The sequence BAD45673.1 differs from that shown. Reason: Erroneous gene model prediction.

The sequence BAF19200.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   Biological processCarbohydrate metabolism
Cell wall biogenesis/degradation
Cellulose degradation
Polysaccharide degradation
   Cellular componentSecreted
   Coding sequence diversityAlternative splicing
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcellulose catabolic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentextracellular region

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functioncellulase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Alternative products

This entry describes 2 isoforms produced by alternative splicing. [Align] [Select]
Isoform 1 (identifier: Q654U4-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Note: Derived from EST data. No experimental confirmation available.
Isoform 2 (identifier: Q654U4-2)

The sequence of this isoform differs from the canonical sequence as follows:
     1-158: Missing.
Note: No experimental confirmation available.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2626 Potential
Chain27 – 538512Endoglucanase 16
PRO_0000249293

Sites

Active site4311 By similarity
Active site4831 By similarity
Active site4921 By similarity

Natural variations

Alternative sequence1 – 158158Missing in isoform 2.
VSP_020389

Sequences

Sequence LengthMass (Da)Tools
Isoform 1 [UniParc].

Last modified September 5, 2006. Version 2.
Checksum: 94ED0101E3408692

FASTA53858,893
        10         20         30         40         50         60 
MRWRRVGDVV AVALLLGAAA AAAAAAARHD YEEALRKSLL YFEAQRSGRL PHGQRVAWRD 

        70         80         90        100        110        120 
HSGLTDGLEQ GVDLVGGYYD AGDHVKFGLP MAFTVTMLSW SLLEYGADVA AAGELAHALD 

       130        140        150        160        170        180 
AIKWGTDYFI KAHTKPHELW AEVGDGDTDH YCWQRPEDMT TSRQAYKVDR RRPGSDVAGE 

       190        200        210        220        230        240 
TAAAMAAASI VFRQSNPHYS HLLLHHAQQL FEFADTYRGK YDSSIAEVKS YYASVSGYHD 

       250        260        270        280        290        300 
ELLWAALWLH RATGRAAYLD YAVDNADEFG GTGWAITEFS WDVKYAGVQI LAARLLMRGE 

       310        320        330        340        350        360 
HEERHRGTLE RYREKAEHYV CACMGRNAAG GADANVERSP GGMLYVRQWN NMQYVTNAAF 

       370        380        390        400        410        420 
LLSAYSDYLA GAGDGDGDGG GGVATCVGGG GAGAGEVFAA AREQVDYVLG SNPRGMSYLV 

       430        440        450        460        470        480 
GYGERFPARV HHRAASIVPY KDSKEFIGCA QGFDDWFGRR GANPNVVVGA IVGGPDRRDR 

       490        500        510        520        530 
FRDDRENYMQ TEACTYNTAP MVGMFAMLNR LSRQESPSTT TTTTATTSSP EMGLSVNR 

« Hide

Isoform 2 [UniParc].

Checksum: 3DE3C0B8934314A1
Show »

FASTA38041,530

References

« Hide 'large scale' references
[1]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[3]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
Strain: cv. Nipponbare.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP004027 Genomic DNA. Translation: BAD45673.1. Sequence problems.
AP008212 Genomic DNA. Translation: BAF19200.1. Sequence problems.
AK065325 mRNA. No translation available.
RefSeqNP_001057286.1. NM_001063821.1.
UniGeneOs.48095.

3D structure databases

ProteinModelPortalQ654U4.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyGH9. Glycoside Hydrolase Family 9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4340645.
KEGGosa:4340645.

Organism-specific databases

GrameneQ654U4.

Phylogenomic databases

eggNOGeuNOG00265.
OMAKEFIGCA.

Family and domain databases

Gene3D1.50.10.10. 1 hit.
InterProIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR018221. Glyco_hydro_9_AS.
[Graphical view]
PfamPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMSSF48208. SSF48208. 1 hit.
PROSITEPS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameGUN16_ORYSJ
AccessionPrimary (citable) accession number: Q654U4
Secondary accession number(s): Q0DD73
Entry history
Integrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: September 5, 2006
Last modified: February 19, 2014
This is version 51 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries