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Q653S3 (P2C70_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable protein phosphatase 2C 70

Short name=OsPP2C70
EC=3.1.3.16
Gene names
Ordered Locus Names:Os09g0558000, LOC_Os09g38550
ORF Names:OJ1065_E04.2-1, OJ1065_E04.2-2, OsJ_029126
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length362 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity.

Sequence similarities

Belongs to the PP2C family.

Contains 1 PP2C-like domain.

Ontologies

Alternative products

This entry describes 3 isoforms produced by alternative splicing. [Align] [Select]
Isoform 1 (identifier: Q653S3-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Note: Derived from EST data. No experimental confirmation available.
Isoform 2 (identifier: Q653S3-2)

The sequence of this isoform differs from the canonical sequence as follows:
     351-352: NE → KI
     353-362: Missing.
Isoform 3 (identifier: Q653S3-3)

The sequence of this isoform differs from the canonical sequence as follows:
     351-351: N → K
     352-362: Missing.
Note: Derived from EST data. No experimental confirmation available.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 362362Probable protein phosphatase 2C 70
PRO_0000363317

Regions

Domain22 – 316295PP2C-like

Sites

Metal binding571Manganese 1 By similarity
Metal binding571Manganese 2 By similarity
Metal binding581Manganese 1; via carbonyl oxygen By similarity
Metal binding2711Manganese 2 By similarity
Metal binding3181Manganese 2 By similarity

Natural variations

Alternative sequence351 – 3522NE → KI in isoform 2.
VSP_036277
Alternative sequence3511N → K in isoform 3.
VSP_036278
Alternative sequence352 – 36211Missing in isoform 3.
VSP_036279
Alternative sequence353 – 36210Missing in isoform 2.
VSP_036280

Sequences

Sequence LengthMass (Da)Tools
Isoform 1 [UniParc].

Last modified February 10, 2009. Version 2.
Checksum: CE3C007EE376E92C

FASTA36239,620
        10         20         30         40         50         60 
MGVYLSTPKT EKYSGEGGND RLRYGLASMQ GWRTTMEDAH TALPRLDECT SFFGVYDGHG 

        70         80         90        100        110        120 
GKAVSKFCAK HLHLQVLKNE AYSSGDLATS VLKSFFRMDE MMKGQRGWRE LAELGDKGQK 

       130        140        150        160        170        180 
FTGMLEGIIW SPKPGESDKP EDTWTEEGPH SHFPGPTSGS TACVAIIRND ELIVANAGDS 

       190        200        210        220        230        240 
RCVLSRKGRA YDLSKDHKPD LDAEKERILN AGGFIVAGRV NGSLNLARAI GDMELKQNEF 

       250        260        270        280        290        300 
LPAERQIVTA EPELNTVKLS EDDEFIVLAC DGIWDCMSSQ EVVDFVHKEM NTEDSLSAVC 

       310        320        330        340        350        360 
EKLLDHCLAP VSGGDGCDNM TVIIVKFKKP SKSAATSSTN QSVSSEEMRP NELDDGPSDP 


NK 

« Hide

Isoform 2 [UniParc].

Checksum: 43BFFA25B7750FC2
Show »

FASTA35238,580
Isoform 3 [UniParc].

Checksum: 6FFA25B7750FC23A
Show »

FASTA35138,466

References

« Hide 'large scale' references
[1]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[3]"The genomes of Oryza sativa: a history of duplications."
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. expand/collapse author list , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[4]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
Strain: cv. Nipponbare.
[5]"Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP005090 Genomic DNA. Translation: BAD45937.1.
AP005090 Genomic DNA. Translation: BAD45938.1.
AP008215 Genomic DNA. Translation: BAF25822.1.
CM000146 Genomic DNA. Translation: EAZ45643.1.
AK111778 mRNA. Translation: BAG99415.1.
RefSeqNP_001063908.1. NM_001070443.1.
UniGeneOs.46329.

3D structure databases

ProteinModelPortalQ653S3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4347831.
KEGGosa:4347831.

Organism-specific databases

GrameneQ653S3.

Phylogenomic databases

eggNOGCOG0631.
HOGENOMHOG000233896.
KOK17499.
OMACTSFFGV.

Family and domain databases

Gene3D3.60.40.10. 1 hit.
InterProIPR001932. PP2C-like_dom.
IPR000222. PP2C_Mn2_Asp60_BS.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERPTHR13832. PTHR13832. 1 hit.
PfamPF00481. PP2C. 2 hits.
[Graphical view]
SMARTSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF81606. SSF81606. 2 hits.
PROSITEPS01032. PP2C. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameP2C70_ORYSJ
AccessionPrimary (citable) accession number: Q653S3
Secondary accession number(s): A3C1F4, Q653S4
Entry history
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: February 10, 2009
Last modified: April 16, 2014
This is version 71 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations