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Q653S3

- P2C70_ORYSJ

UniProt

Q653S3 - P2C70_ORYSJ

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Protein

Probable protein phosphatase 2C 70

Gene
Os09g0558000, LOC_Os09g38550, OJ1065_E04.2-1, OJ1065_E04.2-2, OsJ_029126
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at transcript leveli

Functioni

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Binds 2 magnesium or manganese ions per subunit By similarity.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi57 – 571Manganese 1 By similarity
Metal bindingi57 – 571Manganese 2 By similarity
Metal bindingi58 – 581Manganese 1; via carbonyl oxygen By similarity
Metal bindingi271 – 2711Manganese 2 By similarity
Metal bindingi318 – 3181Manganese 2 By similarity

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. protein serine/threonine phosphatase activity Source: InterPro

GO - Biological processi

  1. protein dephosphorylation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protein phosphatase

Keywords - Ligandi

Magnesium, Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein phosphatase 2C 70 (EC:3.1.3.16)
Short name:
OsPP2C70
Gene namesi
Ordered Locus Names:Os09g0558000, LOC_Os09g38550
ORF Names:OJ1065_E04.2-1, OJ1065_E04.2-2, OsJ_029126
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 9

Organism-specific databases

GrameneiQ653S3.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 362362Probable protein phosphatase 2C 70PRO_0000363317Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ653S3.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini22 – 316295PP2C-likeAdd
BLAST

Sequence similaritiesi

Belongs to the PP2C family.
Contains 1 PP2C-like domain.

Phylogenomic databases

eggNOGiCOG0631.
HOGENOMiHOG000233896.
KOiK17499.
OMAiEEMRPNE.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR001932. PP2C-like_dom.
IPR000222. PP2C_Mn2_Asp60_BS.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 2 hits.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 2 hits.
PROSITEiPS01032. PP2C. 1 hit.
[Graphical view]

Sequences (3)i

Sequence statusi: Complete.

This entry describes 3 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q653S3-1) [UniParc]FASTAAdd to Basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

MGVYLSTPKT EKYSGEGGND RLRYGLASMQ GWRTTMEDAH TALPRLDECT    50
SFFGVYDGHG GKAVSKFCAK HLHLQVLKNE AYSSGDLATS VLKSFFRMDE 100
MMKGQRGWRE LAELGDKGQK FTGMLEGIIW SPKPGESDKP EDTWTEEGPH 150
SHFPGPTSGS TACVAIIRND ELIVANAGDS RCVLSRKGRA YDLSKDHKPD 200
LDAEKERILN AGGFIVAGRV NGSLNLARAI GDMELKQNEF LPAERQIVTA 250
EPELNTVKLS EDDEFIVLAC DGIWDCMSSQ EVVDFVHKEM NTEDSLSAVC 300
EKLLDHCLAP VSGGDGCDNM TVIIVKFKKP SKSAATSSTN QSVSSEEMRP 350
NELDDGPSDP NK 362

Note: Derived from EST data. No experimental confirmation available.

Length:362
Mass (Da):39,620
Last modified:February 10, 2009 - v2
Checksum:iCE3C007EE376E92C
GO
Isoform 2 (identifier: Q653S3-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     351-352: NE → KI
     353-362: Missing.

Show »
Length:352
Mass (Da):38,580
Checksum:i43BFFA25B7750FC2
GO
Isoform 3 (identifier: Q653S3-3) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     351-351: N → K
     352-362: Missing.

Note: Derived from EST data. No experimental confirmation available.

Show »
Length:351
Mass (Da):38,466
Checksum:i6FFA25B7750FC23A
GO

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei351 – 3522NE → KI in isoform 2. VSP_036277
Alternative sequencei351 – 3511N → K in isoform 3. VSP_036278
Alternative sequencei352 – 36211Missing in isoform 3. VSP_036279Add
BLAST
Alternative sequencei353 – 36210Missing in isoform 2. VSP_036280

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP005090 Genomic DNA. Translation: BAD45937.1.
AP005090 Genomic DNA. Translation: BAD45938.1.
AP008215 Genomic DNA. Translation: BAF25822.1.
CM000146 Genomic DNA. Translation: EAZ45643.1.
AK111778 mRNA. Translation: BAG99415.1.
RefSeqiNP_001063908.1. NM_001070443.1. [Q653S3-2]
UniGeneiOs.46329.

Genome annotation databases

GeneIDi4347831.
KEGGiosa:4347831.

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP005090 Genomic DNA. Translation: BAD45937.1 .
AP005090 Genomic DNA. Translation: BAD45938.1 .
AP008215 Genomic DNA. Translation: BAF25822.1 .
CM000146 Genomic DNA. Translation: EAZ45643.1 .
AK111778 mRNA. Translation: BAG99415.1 .
RefSeqi NP_001063908.1. NM_001070443.1. [Q653S3-2 ]
UniGenei Os.46329.

3D structure databases

ProteinModelPortali Q653S3.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4347831.
KEGGi osa:4347831.

Organism-specific databases

Gramenei Q653S3.

Phylogenomic databases

eggNOGi COG0631.
HOGENOMi HOG000233896.
KOi K17499.
OMAi EEMRPNE.

Family and domain databases

Gene3Di 3.60.40.10. 1 hit.
InterProi IPR001932. PP2C-like_dom.
IPR000222. PP2C_Mn2_Asp60_BS.
IPR015655. Protein_Pase_2C.
[Graphical view ]
PANTHERi PTHR13832. PTHR13832. 1 hit.
Pfami PF00481. PP2C. 2 hits.
[Graphical view ]
SMARTi SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view ]
SUPFAMi SSF81606. SSF81606. 2 hits.
PROSITEi PS01032. PP2C. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
    Strain: cv. Nipponbare.
  5. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
    Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
    BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiP2C70_ORYSJ
AccessioniPrimary (citable) accession number: Q653S3
Secondary accession number(s): A3C1F4, Q653S4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: February 10, 2009
Last modified: May 14, 2014
This is version 72 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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