Q653F4 (GT61_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Probable glucuronosyltransferase Os06g0687900
EC=2.4.-.-

Gene names

Ordered Locus Names:	Os06g0687900, LOC_Os06g47340
ORF Names:	P0623A10.33, P0661G04.6, OsJ_22428

Organism

Oryza sativa subsp. japonica (Rice)

Taxonomic identifier

39947 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza

Protein attributes

Sequence length	524 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Function	Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls By similarity.
Subcellular location	Golgi apparatus membrane; Single-pass type II membrane protein By similarity.
Sequence similarities	Belongs to the glycosyltransferase 43 family.
Sequence caution	The sequence BAB20991.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. The sequence BAF20325.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

Ontologies

Keywords
Biological process	Cell wall biogenesis/degradation
Cellular component	Golgi apparatus Membrane
Domain	Signal-anchor Transmembrane Transmembrane helix
Molecular function	Glycosyltransferase Transferase
PTM	Glycoprotein
Gene Ontology (GO)
Biological process	cellular cell wall organization Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	Golgi membrane Inferred from electronic annotation. Source: UniProtKB-SubCell integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 524	524	Probable glucuronosyltransferase Os06g0687900		PRO_0000407560
Regions
	Topological domain	1 – 51	51	Cytoplasmic Potential
	Transmembrane	52 – 71	20	Helical; Signal-anchor for type II membrane protein; Potential
	Topological domain	72 – 524	453	Lumenal Potential
	Compositional bias	101 – 119	19	Poly-Thr
Amino acid modifications
	Glycosylation	132	1	N-linked (GlcNAc...) Potential
	Glycosylation	135	1	N-linked (GlcNAc...) Potential
	Glycosylation	240	1	N-linked (GlcNAc...) Potential
	Glycosylation	353	1	N-linked (GlcNAc...) Potential
Experimental info
	Sequence conflict	409	1	D → Y in BAB20991. Ref.4

Sequences

	Sequence		Length	Mass (Da)
	Q653F4 [UniParc]. Last modified October 25, 2004. Version 1. Checksum: BE470016EFBEB6FA	FASTA	524	57,267
	10 20 30 40 50 60 MMKSLLPQSQ LRRSAAAASA ARSSGGGAGS GGADGAGSDG GAGGRAPATS TFWFLLHALC 70 80 90 100 110 120 CLVSLFLGFR FSRLLFFLLF STTALYSSTS SSSSSAVLRA TTTTTTTTTT TTTTTNTFTL 130 140 150 160 170 180 SFQANPNPPP SNLSNHTALD AAGAAGHTQS HVVVGRHGIR IRPWPHPDPV EVMRAHRIME 190 200 210 220 230 240 RVQEEQRRWY GVKEPRHVLV VTPTYSRAFQ ALHLTGLLHS LRNVPYPLTW IVVEAGGTTN 250 260 270 280 290 300 ATASLLARSD LTIVHIPFPD RMPHDWADRH ATENRMRLHA LRVIRERKMD GVIVFADDSN 310 320 330 340 350 360 VHSLELFDEV QKVQWMGAVS VGILAHTGTA DQPRLSEEDK QNMPLPVQGP ACNSSGHLAG 370 380 390 400 410 420 WHTFNSLPFA GKTATVVGEA APVLPRGLEW AGFVLNSRIL WKEAEGKPDW VKDLDAVGEN 430 440 450 460 470 480 GEEIENPLIL LNDPSSVEPL GNCGKKILLW WLRVEARADS KFPQGWVIEP PLDIVVPAKR 490 500 510 520 TPWPETTAEL SAELVDSKQD QEGRRLSRTD RSSRSRSTTK RKEN

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed: 16100779] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[2]	"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice." The rice full-length cDNA consortium Science 301:376-379(2003) [PubMed: 12869764] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Nipponbare.
[3]	"The genomes of Oryza sativa: a history of duplications." Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H. PLoS Biol. 3:266-281(2005) [PubMed: 15685292] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[4]	"Cloning of cDNA coding for UDP-glucuronyltransferase-like protein in rice." Liu S., Takano T. Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 234-524. Strain: cv. Nipponbare.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP003935 Genomic DNA. Translation: BAD45607.1. AP005395 Genomic DNA. Translation: BAD46063.1. AP008212 Genomic DNA. Translation: BAF20325.1. Different initiation. CM000143 Genomic DNA. Translation: EAZ38081.1. AB054003 mRNA. Translation: BAB20991.1. Different initiation.
RefSeq	NP_001058411.1. NM_001064946.1.
UniGene	Os.425.
3D structure databases
ProteinModelPortal	Q653F4.
ModBase	Search...
Protein family/group databases
CAZy	GT43. Glycosyltransferase Family 43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	LOC_Os06g47340.1; LOC_Os06g47340.1; LOC_Os06g47340.
GeneID	4341895.
KEGG	osa:4341895.
Organism-specific databases
Gramene	Q653F4.
Phylogenomic databases
OMA	QGPACNS.
Family and domain databases
InterPro	IPR005027. Glyco_trans_43. [Graphical view]
PANTHER	PTHR10896. Glyco_trans_43. 1 hit.
Pfam	PF03360. Glyco_transf_43. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

GT61_ORYSJ

Accession

Primary (citable) accession number: Q653F4
Secondary accession number(s): Q0D9Z8, Q9FRT0

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 3, 2011
Last sequence update:	October 25, 2004
Last modified:	September 21, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program