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Protein

Endoglucanase 17

Gene

GLU13

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei406By similarity1
Active sitei458By similarity1
Active sitei467By similarity1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Cell wall biogenesis/degradation, Cellulose degradation, Polysaccharide degradation

Protein family/group databases

CAZyiGH9. Glycoside Hydrolase Family 9.

Names & Taxonomyi

Protein namesi
Recommended name:
Endoglucanase 17 (EC:3.2.1.4)
Alternative name(s):
Endo-1,4-beta glucanase 17
OsGLU13
Gene namesi
Name:GLU13
Ordered Locus Names:Os06g0256900, LOC_Os06g14540
ORF Names:OsJ_020012, P0624H09.19
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 6

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_000024929422 – 497Endoglucanase 17Add BLAST476

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi451N-linked (GlcNAc...)Sequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ652F9.
PRIDEiQ652F9.

Expressioni

Gene expression databases

GenevisibleiQ652F9. OS.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os06g14540.1.

Structurei

3D structure databases

ProteinModelPortaliQ652F9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410IISA. Eukaryota.
ENOG410YBFA. LUCA.
HOGENOMiHOG000021033.
InParanoidiQ652F9.
OMAiYANYASH.
OrthoDBiEOG093608GU.

Family and domain databases

Gene3Di1.50.10.10. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR033126. Glyco_hydro_9_Asp/Glu_AS.
IPR018221. Glyco_hydro_9_His_AS.
[Graphical view]
PfamiPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.
PROSITEiPS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
PS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q652F9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAAGGAVLL LVLATATSVT GQHDYSDALH KSILFFEGQR SGRLPPDQRL
60 70 80 90 100
RWRRDSALND GATAGVDLTG GYYDAGDNVK FGFPMAFTAT LMSWGLIDFG
110 120 130 140 150
RSFGAHAAEA REAVRWATDY LMKATATPNT VYVQVGDAFR DHSCWERPED
160 170 180 190 200
MDTPRTVYKV DPSHPGSDVA AETAAALAAA SIVFRDADPD YSNRLLDRAI
210 220 230 240 250
QVFEFADKYR GPYSSSLHAA VCPCYCDYSG YKDELLWGAA WLHKASRRRE
260 270 280 290 300
YRDYIKRNEV VLGASEAINE FGWDNKHAGI NVLISKEVLM GKDEYFQSFR
310 320 330 340 350
VNADNFICTL LPGISNHPQI QYSPGGLLFK VGNSNMQHVT SLSFLLLAYS
360 370 380 390 400
NYLSHANVRV PCGTSSASPV QLRRVAKRQV DYILGDNPLR MSYMVGYGSR
410 420 430 440 450
YPLRIHHRGS SLPSVAAHPA QIGCKAGATY YASAAPNPNL LVGAVVGGPS
460 470 480 490
NTSDAFPDAR AVFQQSEPTT YINAPLLGLL AYFSAHPNLA QSDLLYD
Length:497
Mass (Da):54,384
Last modified:October 25, 2004 - v1
Checksum:i7AA1465C0A72B8D3
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti331V → A in AK060686 (PubMed:12869764).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP005619 Genomic DNA. Translation: BAD46308.1.
AP008212 Genomic DNA. Translation: BAF19232.1.
AP014962 Genomic DNA. Translation: BAS97102.1.
CM000143 Genomic DNA. Translation: EAZ36529.1.
AK060686 mRNA. No translation available.
RefSeqiXP_015641944.1. XM_015786458.1.
UniGeneiOs.51106.

Genome annotation databases

EnsemblPlantsiOS06T0256900-01; OS06T0256900-01; OS06G0256900.
GeneIDi4340679.
GrameneiOS06T0256900-01; OS06T0256900-01; OS06G0256900.
KEGGiosa:4340679.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP005619 Genomic DNA. Translation: BAD46308.1.
AP008212 Genomic DNA. Translation: BAF19232.1.
AP014962 Genomic DNA. Translation: BAS97102.1.
CM000143 Genomic DNA. Translation: EAZ36529.1.
AK060686 mRNA. No translation available.
RefSeqiXP_015641944.1. XM_015786458.1.
UniGeneiOs.51106.

3D structure databases

ProteinModelPortaliQ652F9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os06g14540.1.

Protein family/group databases

CAZyiGH9. Glycoside Hydrolase Family 9.

Proteomic databases

PaxDbiQ652F9.
PRIDEiQ652F9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS06T0256900-01; OS06T0256900-01; OS06G0256900.
GeneIDi4340679.
GrameneiOS06T0256900-01; OS06T0256900-01; OS06G0256900.
KEGGiosa:4340679.

Phylogenomic databases

eggNOGiENOG410IISA. Eukaryota.
ENOG410YBFA. LUCA.
HOGENOMiHOG000021033.
InParanoidiQ652F9.
OMAiYANYASH.
OrthoDBiEOG093608GU.

Gene expression databases

GenevisibleiQ652F9. OS.

Family and domain databases

Gene3Di1.50.10.10. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR033126. Glyco_hydro_9_Asp/Glu_AS.
IPR018221. Glyco_hydro_9_His_AS.
[Graphical view]
PfamiPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.
PROSITEiPS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
PS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiGUN17_ORYSJ
AccessioniPrimary (citable) accession number: Q652F9
Secondary accession number(s): A0A0P0WUX1, Q0DD41
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: October 25, 2004
Last modified: November 30, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.