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Q652F9

- GUN17_ORYSJ

UniProt

Q652F9 - GUN17_ORYSJ

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Protein

Endoglucanase 17

Gene

GLU13

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei406 – 4061By similarity
Active sitei458 – 4581By similarity
Active sitei467 – 4671By similarity

GO - Molecular functioni

  1. cellulase activity Source: UniProtKB-EC

GO - Biological processi

  1. cellulose catabolic process Source: UniProtKB-KW
  2. cell wall organization Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Cell wall biogenesis/degradation, Cellulose degradation, Polysaccharide degradation

Protein family/group databases

CAZyiGH9. Glycoside Hydrolase Family 9.

Names & Taxonomyi

Protein namesi
Recommended name:
Endoglucanase 17 (EC:3.2.1.4)
Alternative name(s):
Endo-1,4-beta glucanase 17
OsGLU13
Gene namesi
Name:GLU13
Ordered Locus Names:Os06g0256900, LOC_Os06g14540
ORF Names:OsJ_020012, P0624H09.19
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 6

Organism-specific databases

GrameneiQ652F9.

Subcellular locationi

Secreted By similarity

GO - Cellular componenti

  1. extracellular region Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121Sequence AnalysisAdd
BLAST
Chaini22 – 497476Endoglucanase 17PRO_0000249294Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi451 – 4511N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Glycoprotein

Structurei

3D structure databases

ProteinModelPortaliQ652F9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiNOG128807.
HOGENOMiHOG000021033.
InParanoidiQ652F9.
OMAiHANVRVP.

Family and domain databases

Gene3Di1.50.10.10. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR018221. Glyco_hydro_9_AS.
[Graphical view]
PfamiPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.
PROSITEiPS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
PS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q652F9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAAAGGAVLL LVLATATSVT GQHDYSDALH KSILFFEGQR SGRLPPDQRL
60 70 80 90 100
RWRRDSALND GATAGVDLTG GYYDAGDNVK FGFPMAFTAT LMSWGLIDFG
110 120 130 140 150
RSFGAHAAEA REAVRWATDY LMKATATPNT VYVQVGDAFR DHSCWERPED
160 170 180 190 200
MDTPRTVYKV DPSHPGSDVA AETAAALAAA SIVFRDADPD YSNRLLDRAI
210 220 230 240 250
QVFEFADKYR GPYSSSLHAA VCPCYCDYSG YKDELLWGAA WLHKASRRRE
260 270 280 290 300
YRDYIKRNEV VLGASEAINE FGWDNKHAGI NVLISKEVLM GKDEYFQSFR
310 320 330 340 350
VNADNFICTL LPGISNHPQI QYSPGGLLFK VGNSNMQHVT SLSFLLLAYS
360 370 380 390 400
NYLSHANVRV PCGTSSASPV QLRRVAKRQV DYILGDNPLR MSYMVGYGSR
410 420 430 440 450
YPLRIHHRGS SLPSVAAHPA QIGCKAGATY YASAAPNPNL LVGAVVGGPS
460 470 480 490
NTSDAFPDAR AVFQQSEPTT YINAPLLGLL AYFSAHPNLA QSDLLYD
Length:497
Mass (Da):54,384
Last modified:October 25, 2004 - v1
Checksum:i7AA1465C0A72B8D3
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti331 – 3311V → A in AK060686. (PubMed:12869764)Curated

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP005619 Genomic DNA. Translation: BAD46308.1.
AP008212 Genomic DNA. Translation: BAF19232.1.
CM000143 Genomic DNA. Translation: EAZ36529.1.
AK060686 mRNA. No translation available.
RefSeqiNP_001057318.1. NM_001063853.1.
UniGeneiOs.51106.

Genome annotation databases

EnsemblPlantsiOS06T0256900-01; OS06T0256900-01; OS06G0256900.
GeneIDi4340679.
KEGGiosa:4340679.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP005619 Genomic DNA. Translation: BAD46308.1 .
AP008212 Genomic DNA. Translation: BAF19232.1 .
CM000143 Genomic DNA. Translation: EAZ36529.1 .
AK060686 mRNA. No translation available.
RefSeqi NP_001057318.1. NM_001063853.1.
UniGenei Os.51106.

3D structure databases

ProteinModelPortali Q652F9.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH9. Glycoside Hydrolase Family 9.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS06T0256900-01 ; OS06T0256900-01 ; OS06G0256900 .
GeneIDi 4340679.
KEGGi osa:4340679.

Organism-specific databases

Gramenei Q652F9.

Phylogenomic databases

eggNOGi NOG128807.
HOGENOMi HOG000021033.
InParanoidi Q652F9.
OMAi HANVRVP.

Family and domain databases

Gene3Di 1.50.10.10. 1 hit.
InterProi IPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR018221. Glyco_hydro_9_AS.
[Graphical view ]
Pfami PF00759. Glyco_hydro_9. 1 hit.
[Graphical view ]
SUPFAMi SSF48208. SSF48208. 1 hit.
PROSITEi PS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
PS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiGUN17_ORYSJ
AccessioniPrimary (citable) accession number: Q652F9
Secondary accession number(s): Q0DD41
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: October 25, 2004
Last modified: October 29, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3