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Q652F9 (GUN17_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 63. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Endoglucanase 17

EC=3.2.1.4
Alternative name(s):
Endo-1,4-beta glucanase 17
OsGLU13
Gene names
Name:GLU13
Ordered Locus Names:Os06g0256900, LOC_Os06g14540
ORF Names:OsJ_020012, P0624H09.19
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length497 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

Subcellular location

Secreted By similarity.

Sequence similarities

Belongs to the glycosyl hydrolase 9 (cellulase E) family.

Ontologies

Keywords
   Biological processCarbohydrate metabolism
Cell wall biogenesis/degradation
Cellulose degradation
Polysaccharide degradation
   Cellular componentSecreted
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
   PTMGlycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcellulose catabolic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentextracellular region

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functioncellulase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2121 Potential
Chain22 – 497476Endoglucanase 17
PRO_0000249294

Sites

Active site4061 By similarity
Active site4581 By similarity
Active site4671 By similarity

Amino acid modifications

Glycosylation4511N-linked (GlcNAc...) Potential

Experimental info

Sequence conflict3311V → A in AK060686. Ref.4

Sequences

Sequence LengthMass (Da)Tools
Q652F9 [UniParc].

Last modified October 25, 2004. Version 1.
Checksum: 7AA1465C0A72B8D3

FASTA49754,384
        10         20         30         40         50         60 
MAAAGGAVLL LVLATATSVT GQHDYSDALH KSILFFEGQR SGRLPPDQRL RWRRDSALND 

        70         80         90        100        110        120 
GATAGVDLTG GYYDAGDNVK FGFPMAFTAT LMSWGLIDFG RSFGAHAAEA REAVRWATDY 

       130        140        150        160        170        180 
LMKATATPNT VYVQVGDAFR DHSCWERPED MDTPRTVYKV DPSHPGSDVA AETAAALAAA 

       190        200        210        220        230        240 
SIVFRDADPD YSNRLLDRAI QVFEFADKYR GPYSSSLHAA VCPCYCDYSG YKDELLWGAA 

       250        260        270        280        290        300 
WLHKASRRRE YRDYIKRNEV VLGASEAINE FGWDNKHAGI NVLISKEVLM GKDEYFQSFR 

       310        320        330        340        350        360 
VNADNFICTL LPGISNHPQI QYSPGGLLFK VGNSNMQHVT SLSFLLLAYS NYLSHANVRV 

       370        380        390        400        410        420 
PCGTSSASPV QLRRVAKRQV DYILGDNPLR MSYMVGYGSR YPLRIHHRGS SLPSVAAHPA 

       430        440        450        460        470        480 
QIGCKAGATY YASAAPNPNL LVGAVVGGPS NTSDAFPDAR AVFQQSEPTT YINAPLLGLL 

       490 
AYFSAHPNLA QSDLLYD 

« Hide

References

« Hide 'large scale' references
[1]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[3]"The genomes of Oryza sativa: a history of duplications."
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. expand/collapse author list , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[4]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Nipponbare.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP005619 Genomic DNA. Translation: BAD46308.1.
AP008212 Genomic DNA. Translation: BAF19232.1.
CM000143 Genomic DNA. Translation: EAZ36529.1.
AK060686 mRNA. No translation available.
RefSeqNP_001057318.1. NM_001063853.1.
UniGeneOs.51106.

3D structure databases

ProteinModelPortalQ652F9.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyGH9. Glycoside Hydrolase Family 9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsOS06T0256900-01; OS06T0256900-01; OS06G0256900.
GeneID4340679.
KEGGosa:4340679.

Organism-specific databases

GrameneQ652F9.

Phylogenomic databases

eggNOGNOG128807.
HOGENOMHOG000021033.
OMAHANVRVP.

Family and domain databases

Gene3D1.50.10.10. 1 hit.
InterProIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
IPR018221. Glyco_hydro_9_AS.
[Graphical view]
PfamPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMSSF48208. SSF48208. 1 hit.
PROSITEPS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
PS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameGUN17_ORYSJ
AccessionPrimary (citable) accession number: Q652F9
Secondary accession number(s): Q0DD41
Entry history
Integrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: October 25, 2004
Last modified: May 14, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries