Q652F9 (GUN17_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Endoglucanase 17
EC=3.2.1.4

Alternative name(s):
Endo-1,4-beta glucanase 17
OsGLU13

Gene names

Name:	GLU13
Ordered Locus Names:	Os06g0256900, LOC_Os06g14540
ORF Names:	OsJ_020012, P0624H09.19

Organism

Oryza sativa subsp. japonica (Rice) [Reference proteome]

Taxonomic identifier

39947 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza › Oryza sativa

Protein attributes

Sequence length	497 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at transcript level

General annotation (Comments)

Catalytic activity	Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Subcellular location	Secreted By similarity.
Sequence similarities	Belongs to the glycosyl hydrolase 9 (cellulase E) family.

Ontologies

Keywords
Biological process	Carbohydrate metabolism Cell wall biogenesis/degradation Cellulose degradation Polysaccharide degradation
Cellular component	Secreted
Domain	Signal
Molecular function	Glycosidase Hydrolase
PTM	Glycoprotein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	cell wall modification involved in multidimensional cell growth Inferred from electronic annotation. Source: EnsemblPlants/Gramene cellulose catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	chloroplast Inferred from electronic annotation. Source: EnsemblPlants/Gramene extracellular region Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	cellulase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 21	21	Potential
	Chain	22 – 497	476	Endoglucanase 17		PRO_0000249294
Sites
	Active site	406	1	By similarity
	Active site	458	1	By similarity
	Active site	467	1	By similarity
Amino acid modifications
	Glycosylation	451	1	N-linked (GlcNAc...) Potential
Experimental info
	Sequence conflict	331	1	V → A in AK060686. Ref.4

Sequences

	Sequence		Length	Mass (Da)
	Q652F9 [UniParc]. Last modified October 25, 2004. Version 1. Checksum: 7AA1465C0A72B8D3	FASTA	497	54,384
	10 20 30 40 50 60 MAAAGGAVLL LVLATATSVT GQHDYSDALH KSILFFEGQR SGRLPPDQRL RWRRDSALND 70 80 90 100 110 120 GATAGVDLTG GYYDAGDNVK FGFPMAFTAT LMSWGLIDFG RSFGAHAAEA REAVRWATDY 130 140 150 160 170 180 LMKATATPNT VYVQVGDAFR DHSCWERPED MDTPRTVYKV DPSHPGSDVA AETAAALAAA 190 200 210 220 230 240 SIVFRDADPD YSNRLLDRAI QVFEFADKYR GPYSSSLHAA VCPCYCDYSG YKDELLWGAA 250 260 270 280 290 300 WLHKASRRRE YRDYIKRNEV VLGASEAINE FGWDNKHAGI NVLISKEVLM GKDEYFQSFR 310 320 330 340 350 360 VNADNFICTL LPGISNHPQI QYSPGGLLFK VGNSNMQHVT SLSFLLLAYS NYLSHANVRV 370 380 390 400 410 420 PCGTSSASPV QLRRVAKRQV DYILGDNPLR MSYMVGYGSR YPLRIHHRGS SLPSVAAHPA 430 440 450 460 470 480 QIGCKAGATY YASAAPNPNL LVGAVVGGPS NTSDAFPDAR AVFQQSEPTT YINAPLLGLL 490 AYFSAHPNLA QSDLLYD

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[2]	"The rice annotation project database (RAP-DB): 2008 update." The rice annotation project (RAP) Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract] Cited for: GENOME REANNOTATION. Strain: cv. Nipponbare.
[3]	"The genomes of Oryza sativa: a history of duplications." Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H. PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[4]	"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice." The rice full-length cDNA consortium Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Nipponbare.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP005619 Genomic DNA. Translation: BAD46308.1. AP008212 Genomic DNA. Translation: BAF19232.1. CM000143 Genomic DNA. Translation: EAZ36529.1. AK060686 mRNA. No translation available.
RefSeq	NP_001057318.1. NM_001063853.1.
UniGene	Os.51106.
3D structure databases
HSSP	HSSP built from PDB template 1TF4 based on UniProtKB P26221.
ProteinModelPortal	Q652F9.
ModBase	Search...
Protein family/group databases
CAZy	GH9. Glycoside Hydrolase Family 9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	LOC_Os06g14540.1; LOC_Os06g14540.1; LOC_Os06g14540.
GeneID	4340679.
KEGG	dosa:Os02t0733300-01. dosa:Os06t0256900-01. osa:4340679.
Organism-specific databases
Gramene	Q652F9.
Phylogenomic databases
eggNOG	NOG128807.
HOGENOM	HOG000021033.
OMA	LRIHHRG.
ProtClustDB	PLN02308.
Gene expression databases
ArrayExpress	Q652F9.
Family and domain databases
Gene3D	1.50.10.10. 1 hit.
InterPro	IPR008928. 6-hairpin_glycosidase-like. IPR012341. 6hp_glycosidase. IPR001701. Glyco_hydro_9. IPR018221. Glyco_hydro_9_AS. [Graphical view]
Pfam	PF00759. Glyco_hydro_9. 1 hit. [Graphical view]
SUPFAM	SSF48208. Glyco_trans_6hp. 1 hit.
PROSITE	PS00592. GLYCOSYL_HYDROL_F9_1. 1 hit. PS00698. GLYCOSYL_HYDROL_F9_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

GUN17_ORYSJ

Accession

Primary (citable) accession number: Q652F9
Secondary accession number(s): Q0DD41

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 5, 2006
Last sequence update:	October 25, 2004
Last modified:	April 3, 2013
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program