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Q65034 (Q65034_9PARA) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Hemagglutinin-neuraminidase EMBL BAA03120.1
Submitted name:
Hemagglutinin-neuraminidase protein EMBL ACJ06715.1
Gene names
Name:HN EMBL ACJ06715.1
OrganismAvian paramyxovirus 4 EMBL BAA03120.1
Taxonomic identifier28274 [NCBI]
Taxonomic lineageViruses › ssRNA negative-strand viruses › Mononegavirales › Paramyxoviridae › Paramyxovirinae › Avulavirus

Protein attributes

Sequence length569 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the paramyxoviruses hemagglutinin-neuraminidase family. RuleBase RU004216

Sequences

Sequence LengthMass (Da)Tools
Q65034 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 99E40CCB21FC8A10

FASTA56963,085
        10         20         30         40         50         60 
MQGDMEGSRD NLTVDDELKT TWRLAYRVVS LLLMVSALII SIVILTRDNS QSIITAINQS 

        70         80         90        100        110        120 
YDADSKWQTG IEGKITSIMT DTLDTRNAAL LHIPLQLNTL EANLLSALGG YTGIGPGDLE 

       130        140        150        160        170        180 
HCRYPVHDSA YLHGVNRLLI NQTADYTAEG PLDHVNFIPA PVTTTGCTRI PSFSVSSSIW 

       190        200        210        220        230        240 
CYTHNVIETG CNDHSGSNQY ISMGVIKRAG NGLPYFSTVV SKYLTDGLNR KSCSVAAGSG 

       250        260        270        280        290        300 
HCYLLCSLVS EPEPDDYVSP DPTPMRLGVL TRDGSYTEQV VPERIFKNIW SANYPGVGSG 

       310        320        330        340        350        360 
AIAGNKVLFP FYGGVKNGST PEVMNRGRYY YIQDPNDYCP DPLQDQILRA EQSYYPTRFG 

       370        380        390        400        410        420 
RRMVMQGVLT CPVSNNSTIA SQCQSYYFNN SLGFIGAESR IYYLNGNIYL YQRSSSWWPH 

       430        440        450        460        470        480 
PQIYLLDSRI ASPGTQNIDS GVNLKMLNVT VITRPSSGFC NSQSRCPNDC LFGVYSDVWP 

       490        500        510        520        530        540 
LSLTSDSIFA FTMYLQGKTT RIDPAWALFS NHVIGHEARL FNKEVSAAYS TTTCFSDTIQ 

       550        560 
NQVYCLSILE VRSELLGAFK IVPFLYRVL

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References

[1]"Molecular characterization and complete genome sequence of avian paramyxovirus type 4 prototype strain duck/Hong Kong/D3/75."
Nayak B., Kumar S., Collins P.L., Samal S.K.
Virol. J. 5:124-124(2008) [PubMed: 18937854] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: APMV-4/duck/Hongkong/D3/75 EMBL ACJ06715.1.
[2]Isode S.
Submitted (JAN-1993) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Duck/HK/D3/75 EMBL BAA03120.1.
[3]"Sequencing and expression of type2 and 4 avian paramyxovirus genes encoding for HN glycoproteins."
Isobe S., Sugita S., Nerome K.
Submitted (JAN-1993) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Duck/HK/D3/75 EMBL BAA03120.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FJ177514 Viral cRNA. Translation: ACJ06715.1.
D14031 Genomic RNA. Translation: BAA03120.1.

3D structure databases

HSSPHSSP built from PDB template 1USR based on UniProtKB P32884.
ProteinModelPortalQ65034.
ModBaseSearch...

Protein family/group databases

CAZyGH83. Glycoside Hydrolase Family 83.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR000665. Hemagglutn-neuramid_glycoprot.
IPR016285. Hemagglutn-neuramid_paramyxo.
IPR011040. Neuraminidase.
[Graphical view]
Gene3DG3DSA:2.120.10.10. Neuraminidase. 1 hit.
PfamPF00423. HN. 1 hit.
[Graphical view]
PIRSFPIRSF001072. Hemagglut-neuramid_paramyxoV. 1 hit.
SUPFAMSSF50939. Sialidase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ65034_9PARA
AccessionPrimary (citable) accession number: Q65034
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: January 25, 2012
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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