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Protein
Submitted name:

Putative alpha-amylase

Gene

BF1000

Organism
Bacteroides fragilis (strain YCH46)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative alpha-amylaseImported
Gene namesi
Ordered Locus Names:BF1000Imported
OrganismiBacteroides fragilis (strain YCH46)Imported
Taxonomic identifieri295405 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides
ProteomesiUP000002197 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi295405.BF1000.

Structurei

3D structure databases

ProteinModelPortaliQ64XM6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 57 family.UniRule annotation

Phylogenomic databases

KOiK07405.
OMAiSDHFYYM.
OrthoDBiEOG6F81Q4.

Family and domain databases

Gene3Di3.20.110.10. 1 hit.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view]
PfamiPF03065. Glyco_hydro_57. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.

Sequencei

Sequence statusi: Complete.

Q64XM6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTICLYFEI HQIIHLKRYR FFDIGADHYY YDDYANETGI NEVAERSYIP
60 70 80 90 100
ALNTLIEMVK NSGGAFKVAL SISGVALEQL EIHAPAVIDL LHILNDTGCC
110 120 130 140 150
EFLAEPYSHG LSSLANEDCF REEVMRQSEK MKQMFGKAPK VFRNSSLIYS
160 170 180 190 200
DEIGATVASM GFKGMLTEGA KHVLGWKSPH YVYHCNQAPS LKLLLRDFKL
210 220 230 240 250
SDDISLRFSN SDWSEYPLFA DKFIGWIDAL PQEEQVINIF MELKALGMAQ
260 270 280 290 300
PLSSNILEFL KALPYCAKEK GITFSTPSEI ISKLKSVSQL DVPYPMSWVD
310 320 330 340 350
EERDTSSWLG NVLQREAFSK LYSVAERVHL CDDRRIKQDW DYLQASNNFR
360 370 380 390 400
FMTTKNTGVW LNRGIYDSPY DAFTNYMNIL GDFIKRVNSL YPEDIDNEEL
410 420 430 440 450
NSLLTTIKNQ GEEIAELHKE VDRLQAKAEK AAKTVKAEPK AAPKKAAAKK
460
PAAKKATAKK ED
Length:462
Mass (Da):52,533
Last modified:October 24, 2004 - v1
Checksum:iA6D4321EEAE99E52
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006841 Genomic DNA. Translation: BAD47750.1.
RefSeqiYP_098284.1. NC_006347.1.

Genome annotation databases

EnsemblBacteriaiBAD47750; BAD47750; BF1000.
GeneIDi3081881.
KEGGibfr:BF1000.
PATRICi21047750. VBIBacFra17906_0998.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006841 Genomic DNA. Translation: BAD47750.1.
RefSeqiYP_098284.1. NC_006347.1.

3D structure databases

ProteinModelPortaliQ64XM6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi295405.BF1000.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD47750; BAD47750; BF1000.
GeneIDi3081881.
KEGGibfr:BF1000.
PATRICi21047750. VBIBacFra17906_0998.

Phylogenomic databases

KOiK07405.
OMAiSDHFYYM.
OrthoDBiEOG6F81Q4.

Family and domain databases

Gene3Di3.20.110.10. 1 hit.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view]
PfamiPF03065. Glyco_hydro_57. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genomic analysis of Bacteroides fragilis reveals extensive DNA inversions regulating cell surface adaptation."
    Kuwahara T., Yamashita A., Hirakawa H., Nakayama H., Toh H., Okada N., Kuhara S., Hattori M., Hayashi T., Ohnishi Y.
    Proc. Natl. Acad. Sci. U.S.A. 101:14919-14924(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: YCH46Imported.

Entry informationi

Entry nameiQ64XM6_BACFR
AccessioniPrimary (citable) accession number: Q64XM6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 24, 2004
Last sequence update: October 24, 2004
Last modified: January 6, 2015
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.