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Q64ST5 (Q64ST5_BACFR) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribonucleoside-diphosphate reductase subunit beta PIRNR PIRNR000355

EC=1.17.4.1 PIRNR PIRNR000355
Gene names
Ordered Locus Names:BF2694 EMBL BAD49444.1
OrganismBacteroides fragilis (strain YCH46) [Complete proteome] [HAMAP] EMBL BAD49444.1
Taxonomic identifier295405 [NCBI]
Taxonomic lineageBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides

Protein attributes

Sequence length349 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides By similarity. PIRNR PIRNR000355

Catalytic activity

2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. PIRNR PIRNR000355

Cofactor

Binds 2 iron ions per subunit By similarity. PIRNR PIRNR000355

Pathway

Genetic information processing; DNA replication. PIRNR PIRNR000355

Sequence similarities

Belongs to the ribonucleoside diphosphate reductase small chain family. PIRNR PIRNR000355

Sequences

Sequence LengthMass (Da)Tools
Q64ST5 [UniParc].

Last modified October 25, 2004. Version 1.
Checksum: 397DC8C148113650

FASTA34941,318
        10         20         30         40         50         60 
METKKLKKNA LFNPEGDTET RLRKMIGGNT TNLNDFNNMR YKWVSDWYRQ GMNNFWIPEE 

        70         80         90        100        110        120 
INLTQDTKDY PHLTPAERTA YDKILSFLVF LDSLQSNNLP TLSEYITANE VNLCLHIQAF 

       130        140        150        160        170        180 
QECVHSQSYS YMLDSICSPE ERNDILYQWK TDEHLLRRNT FIGNCYNEFQ ENRDGFALMK 

       190        200        210        220        230        240 
TLIANYILEG IYFYSGFMFF YNLSRNGKMS GSAQEIRYIN RDENTHLWLF RNIILELKKE 

       250        260        270        280        290        300 
EPELFTPDKV KVYEEMMREG VKQEIAWGQY VIGDQIQGLN RQMISDYIHF LGNLRWSSLG 

       310        320        330        340 
YTPLYEDNRK EPESMHWVSQ YSNANMVKTD FFEAKSTAYA KSTALEDDL 

« Hide

References

[1]"Genomic analysis of Bacteroides fragilis reveals extensive DNA inversions regulating cell surface adaptation."
Kuwahara T., Yamashita A., Hirakawa H., Nakayama H., Toh H., Okada N., Kuhara S., Hattori M., Hayashi T., Ohnishi Y.
Proc. Natl. Acad. Sci. U.S.A. 101:14919-14924(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: YCH46 EMBL BAD49444.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP006841 Genomic DNA. Translation: BAD49444.1.
RefSeqYP_099978.1. NC_006347.1.

3D structure databases

ProteinModelPortalQ64ST5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING295405.BF2694.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD49444; BAD49444; BF2694.
GeneID3083574.
KEGGbfr:BF2694.
PATRIC21051019. VBIBacFra17906_2606.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00526.
OMAACANHWM.
OrthoDBEOG6J48J7.
ProtClustDBPRK09614.

Enzyme and pathway databases

UniPathwayUPA00326.

Family and domain databases

Gene3D1.10.620.20. 1 hit.
InterProIPR009078. Ferritin-like_SF.
IPR012348. RNR-rel.
IPR026023. RNR_bsu_prok.
IPR000358. RNR_small.
[Graphical view]
PANTHERPTHR23409. PTHR23409. 1 hit.
PfamPF00268. Ribonuc_red_sm. 1 hit.
[Graphical view]
PIRSFPIRSF000355. NrdB. 1 hit.
SUPFAMSSF47240. SSF47240. 1 hit.
PROSITEPS00368. RIBORED_SMALL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ64ST5_BACFR
AccessionPrimary (citable) accession number: Q64ST5
Entry history
Integrated into UniProtKB/TrEMBL: October 25, 2004
Last sequence update: October 25, 2004
Last modified: December 11, 2013
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)