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Protein
Submitted name:

Sigma factor SigB regulation protein RsbU

Gene

BF2968

Organism
Bacteroides fragilis (strain YCH46)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Sigma factor SigB regulation protein RsbUImported
Gene namesi
Ordered Locus Names:BF2968Imported
OrganismiBacteroides fragilis (strain YCH46)Imported
Taxonomic identifieri295405 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides
ProteomesiUP000002197 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliQ64S15.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK07315.
OMAiERKWGDL.
OrthoDBiEOG69GZGV.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR001932. PPM-type_phosphatase_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEiPS51746. PPM_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q64S15-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVKILSVDD ELDLEVLLTQ YFRRQIRKGE YEFAFAHNGL EALQKLLETP
60 70 80 90 100
DFDIILSDIN MPEMDGLTLL AKVNELKNPA MKCIMVSAYG DMDNIRSAMN
110 120 130 140 150
KGAFDFATKP IDLDDLSRTI EKAIEQVRYI RESQQEHNQL ESIKNDLAIA
160 170 180 190 200
GEIQQTILPR SFPPFPELTE VVNIYASMTP AKDVGGDFYD FFQIDDERIG
210 220 230 240 250
LVIADVSGKG VPASLFMAVS RTLLRATALR GVSSAECLTY ANKLLCKESL
260 270 280 290 300
DSMFVTVFYG IYHYKTGMMD YTNAGHNPPY LLRGGRTVEC LPVASNFVVG
310 320 330 340 350
VFDDIEFESN TLTFGIGDTL LLYTDGVTEA FNDKREQFSE SNLQDILASM
360 370 380
HESSSAKEVV TSVLQSVKTF SGDYPQSDDI TLLSLQRIK
Length:389
Mass (Da):43,476
Last modified:October 25, 2004 - v1
Checksum:i9EFE6BE7BAB8AC4A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006841 Genomic DNA. Translation: BAD49716.1.
RefSeqiWP_011203082.1. NC_006347.1.
YP_100250.1. NC_006347.1.

Genome annotation databases

EnsemblBacteriaiBAD49716; BAD49716; BF2968.
GeneIDi3083319.
KEGGibfr:BF2968.
PATRICi21051512. VBIBacFra17906_2847.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006841 Genomic DNA. Translation: BAD49716.1.
RefSeqiWP_011203082.1. NC_006347.1.
YP_100250.1. NC_006347.1.

3D structure databases

ProteinModelPortaliQ64S15.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD49716; BAD49716; BF2968.
GeneIDi3083319.
KEGGibfr:BF2968.
PATRICi21051512. VBIBacFra17906_2847.

Phylogenomic databases

KOiK07315.
OMAiERKWGDL.
OrthoDBiEOG69GZGV.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR001932. PPM-type_phosphatase_dom.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF00072. Response_reg. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEiPS51746. PPM_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genomic analysis of Bacteroides fragilis reveals extensive DNA inversions regulating cell surface adaptation."
    Kuwahara T., Yamashita A., Hirakawa H., Nakayama H., Toh H., Okada N., Kuhara S., Hattori M., Hayashi T., Ohnishi Y.
    Proc. Natl. Acad. Sci. U.S.A. 101:14919-14924(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: YCH46Imported.

Entry informationi

Entry nameiQ64S15_BACFR
AccessioniPrimary (citable) accession number: Q64S15
Entry historyi
Integrated into UniProtKB/TrEMBL: October 25, 2004
Last sequence update: October 25, 2004
Last modified: June 24, 2015
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.