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Q64RC7 (Q64RC7_BACFR) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:BF3209 EMBL BAD49954.1
OrganismBacteroides fragilis (strain YCH46) [Complete proteome] [HAMAP] EMBL BAD49954.1
Taxonomic identifier295405 [NCBI]
Taxonomic lineageBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides

Protein attributes

Sequence length481 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q64RC7 [UniParc].

Last modified October 25, 2004. Version 1.
Checksum: 212A3767727131DB

FASTA48155,220
        10         20         30         40         50         60 
MENGVMMQYF EWNLPNDGNL WKQLKEDASH LHEIGVTAVW IPPAYKADEQ QDEGYATYDL 

        70         80         90        100        110        120 
YDLGEFDQKG TVRTKYGTKE ELKEMIDELH KNHISVYLDV VLNHKAGGDF TEKFIVVEVD 

       130        140        150        160        170        180 
PNDRTQALGK PFEIQGWTGY SFHGRKDKCS DFKWHWYHFS GTGFDDAKKR SGIFQIQGEG 

       190        200        210        220        230        240 
KAWSEGVDNE NGNYDFLLCN DIDLDHPEVV TELNRWGKWV SKELNLDGMR LDAIKHMKDK 

       250        260        270        280        290        300 
FIAQFLDAVR SERGDKFYAV GEYWNGDLNT LDAYIKSVGH KVNLFDVPLH YNLFQASQEG 

       310        320        330        340        350        360 
KNYDLQNILK NTLVEHHCDL AVTFVDNHDS QSGSSLESQI EDWFKPLAYG LILLIKDGYP 

       370        380        390        400        410        420 
CLFYGDYYGV KGENSPHTQI INILLDARRK YAYGDQIEYF DHPSAIGFIR TGDEEHVGSG 

       430        440        450        460        470        480 
LVFLMSNDEA GSKKMDLGEE HKGEIWHEIT GNIQQEITLD EKGSGEFSVN TRNIAVWIKK 


N 

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References

[1]"Genomic analysis of Bacteroides fragilis reveals extensive DNA inversions regulating cell surface adaptation."
Kuwahara T., Yamashita A., Hirakawa H., Nakayama H., Toh H., Okada N., Kuhara S., Hattori M., Hayashi T., Ohnishi Y.
Proc. Natl. Acad. Sci. U.S.A. 101:14919-14924(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: YCH46 EMBL BAD49954.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP006841 Genomic DNA. Translation: BAD49954.1.
RefSeqYP_100488.1. NC_006347.1.

3D structure databases

ProteinModelPortalQ64RC7.
SMRQ64RC7. Positions 2-480.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING295405.BF3209.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD49954; BAD49954; BF3209.
GeneID3083111.
KEGGbfr:BF3209.
PATRIC21051976. VBIBacFra17906_3077.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.
OMAWTKVDAR.
OrthoDBEOG65QWH3.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ64RC7_BACFR
AccessionPrimary (citable) accession number: Q64RC7
Entry history
Integrated into UniProtKB/TrEMBL: October 25, 2004
Last sequence update: October 25, 2004
Last modified: May 14, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)