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Q64NJ2 (Q64NJ2_BACFR) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Transcription antitermination protein nusG RuleBase RU000538
Gene names
Ordered Locus Names:BF4197
OrganismBacteroides fragilis (strain YCH46) [Complete proteome] [HAMAP]
Taxonomic identifier295405 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides

Protein attributes

Sequence length180 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase By similarity. SAAS SAAS006645 RuleBase RU000538

Sequence similarities

Belongs to the nusG family. RuleBase RU003559

Sequences

Sequence LengthMass (Da)Tools
Q64NJ2 [UniParc].

Last modified October 25, 2004. Version 1.
Checksum: F041445C9EE481EC

FASTA18020,198
        10         20         30         40         50         60 
MSEIEKKWYV LRAISGKEAK VKEYLEADIK NSDLGEYVSQ VLIPTEKVYQ VRNGKKIVKE 

        70         80         90        100        110        120 
RSYLPGYVLV EAALVGEVSH HLRNTPNVIG FLGGSDKPVP LRQSEVNRIL GTVDELQETG 

       130        140        150        160        170        180 
EDLNVPYIVG ETVKVTFGPF SGFSGIIEEV NSEKKKLKVM VKIFGRKTPL ELGFMQVEKE

« Hide

References

[1]"Genomic analysis of Bacteroides fragilis reveals extensive DNA inversions regulating cell surface adaptation."
Kuwahara T., Yamashita A., Hirakawa H., Nakayama H., Toh H., Okada N., Kuhara S., Hattori M., Hayashi T., Ohnishi Y.
Proc. Natl. Acad. Sci. U.S.A. 101:14919-14924(2004) [PubMed: 15466707] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: YCH46.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP006841 Genomic DNA. Translation: BAD50940.1.
RefSeqYP_101474.1. NC_006347.1.

3D structure databases

ProteinModelPortalQ64NJ2.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3085279.
GenomeReviewsGene locus BF4197 in contig AP006841_GR.
KEGGbfr:BF4197.
PATRIC21053988. VBIBacFra17906_4052.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG751162.
OMAVASGCEK.
PhylomeDBQ64NJ2.
ProtClustDBCLSK823269.

Family and domain databases

InterProIPR005824. KOW.
IPR001062. Transcrpt_antiterm_NusG.
IPR006645. Transcrpt_antiterm_NusG_N.
IPR014722. Transl_SH3-like_sub.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
Gene3DG3DSA:2.30.30.30. Ribosomal_L2. 1 hit.
G3DSA:3.30.70.940. Transcrpt_antiterm_NusG_N. 1 hit.
KOK02601.
PfamPF00467. KOW. 1 hit.
PF02357. NusG. 1 hit.
[Graphical view]
PRINTSPR00338. NUSGTNSCPFCT.
SMARTSM00739. KOW. 1 hit.
SM00738. NGN. 1 hit.
[Graphical view]
SUPFAMSSF82679. Transcrpt_antiterm_NusG_N. 1 hit.
SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMsTIGR00922. NusG. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ64NJ2_BACFR
AccessionPrimary (citable) accession number: Q64NJ2
Entry history
Integrated into UniProtKB/TrEMBL: October 25, 2004
Last sequence update: October 25, 2004
Last modified: January 25, 2012
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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