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Protein
Submitted name:

Exo-alpha sialidase

Gene

BF4242

Organism
Bacteroides fragilis (strain YCH46)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Exo-alpha sialidaseImported
Gene namesi
Ordered Locus Names:BF4242Imported
OrganismiBacteroides fragilis (strain YCH46)Imported
Taxonomic identifieri295405 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides
ProteomesiUP000002197 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliQ64NE9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01186.
OMAiLNMRDDR.
OrthoDBiEOG67DPK3.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR029456. Sialidase_N.
IPR008377. Sialidase_trypan.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF14873. BNR_assoc_N. 1 hit.
[Graphical view]
PRINTSiPR01803. TCSIALIDASE.
SUPFAMiSSF50939. SSF50939. 1 hit.

Sequencei

Sequence statusi: Complete.

Q64NE9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKFYLLFIFI SLNLCSFSAR ATDTIFVYET QVPILIERQD NMLFLMRLTT
60 70 80 90 100
ARSDTKLNEV VLRLGQNVNL SNIQSIKLYY GGTEARQNYG KELYLPVTYI
110 120 130 140 150
SRDVSGKTLA ANPSYSINKS QVNNPGRKVI LNANQKLFPG INYFWISLQM
160 170 180 190 200
KPGASLLDKV SAKIVTVKVD NKEALIYTVS PENITHRVGV GVRHAGDDGS
210 220 230 240 250
AAFRIPGLAT TNKGTLLGVY DVRYNSSVDL QEHMDVGLSR SVDGGKTWEK
260 270 280 290 300
MRLPLAFGET GGLPAAQNGV GDPSILVDTK TNTTWVVAAW THGMGNQRAW
310 320 330 340 350
WSSYPGMDMN HTAQLVLSKS TDDGKTWSEP INITDQVKEP SWYFLLQGPG
360 370 380 390 400
RGITMQDGTL VFPIQFIDST RVPNAGIMYS KDRGETWKIH NYARTNTTEA
410 420 430 440 450
QVAEVEPGVL MLNMRDNRGG SRAVATTKDL GKTWTEHPSS RKALQEPVCM
460 470 480 490 500
ASLISVKAAD NTLNKDILLF SNPNTVKGRH HITIKASLDG GITWLPEHQV
510 520 530 540
MLDEGDGWGY SCLTMIDKET VGILYESSVA HMTFQAIRLR DIIQ
Length:544
Mass (Da):60,366
Last modified:October 25, 2004 - v1
Checksum:i745E6862868C9F0D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006841 Genomic DNA. Translation: BAD50984.1.
RefSeqiWP_005822175.1. NC_006347.1.
YP_101518.1. NC_006347.1.

Genome annotation databases

EnsemblBacteriaiBAD50984; BAD50984; BF4242.
GeneIDi3085323.
KEGGibfr:BF4242.
PATRICi21054078. VBIBacFra17906_4092.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006841 Genomic DNA. Translation: BAD50984.1.
RefSeqiWP_005822175.1. NC_006347.1.
YP_101518.1. NC_006347.1.

3D structure databases

ProteinModelPortaliQ64NE9.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD50984; BAD50984; BF4242.
GeneIDi3085323.
KEGGibfr:BF4242.
PATRICi21054078. VBIBacFra17906_4092.

Phylogenomic databases

KOiK01186.
OMAiLNMRDDR.
OrthoDBiEOG67DPK3.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR029456. Sialidase_N.
IPR008377. Sialidase_trypan.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF14873. BNR_assoc_N. 1 hit.
[Graphical view]
PRINTSiPR01803. TCSIALIDASE.
SUPFAMiSSF50939. SSF50939. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genomic analysis of Bacteroides fragilis reveals extensive DNA inversions regulating cell surface adaptation."
    Kuwahara T., Yamashita A., Hirakawa H., Nakayama H., Toh H., Okada N., Kuhara S., Hattori M., Hayashi T., Ohnishi Y.
    Proc. Natl. Acad. Sci. U.S.A. 101:14919-14924(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: YCH46Imported.

Entry informationi

Entry nameiQ64NE9_BACFR
AccessioniPrimary (citable) accession number: Q64NE9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 25, 2004
Last sequence update: October 25, 2004
Last modified: June 24, 2015
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.