Q642T6 (Q642T6_XENTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Crisp2 protein EMBL AAH80935.1

Submitted name:
Uncharacterized protein Ensembl ENSXETP00000024375

Gene names

Name:

crisp2 EMBL AAH80935.1 Ensembl ENSXETP00000024375 Xenbase XB-GENE-951048

Organism

Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) [Reference proteome] EMBL AAH80935.1

Taxonomic identifier

8364 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amphibia › Batrachia › Anura › Pipoidea › Pipidae › Xenopodinae › Xenopus › Silurana

Protein attributes

Sequence length	240 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 SCP domain. SAAS SAAS013871

Ontologies

Keywords
PTM	Disulfide bond SAAS SAAS018244
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	extracellular region Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q642T6 [UniParc]. Last modified October 25, 2004. Version 1. Checksum: 7C69AD291DD16724	FASTA	240	26,442
	10 20 30 40 50 60 MMLIGALCIA AFMALAVESA DPPFSSISTD NVTVTQIIIN AHNNYRRNAS PSARNMLKMV 70 80 90 100 110 120 WNKDAAINAA SWAATCSESH SPSDKRTIPG FGCGENLYMA SYPASWEEAV KGWYSEYNDF 130 140 150 160 170 180 QYGVGPKSPG LVTGHYTQVM WYNSYMVGCS VSYCPKSPYK YFYVCQYCPA GNLDSTMSTP 190 200 210 220 230 240 YKTGPKCADC PTACDNGLCT NYCPYQDLYS NCKTYASYCN TFPTIRDGCK ATCLCTNQII

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	NIH - Xenopus Gene Collection (XGC) project Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Embryo EMBL AAH80935.1.
[2]	"The genome of the Western clawed frog Xenopus tropicalis." Hellsten U., Harland R.M., Gilchrist M.J., Hendrix D., Jurka J., Kapitonov V., Ovcharenko I., Putnam N.H., Shu S., Taher L., Blitz I.L., Blumberg B., Dichmann D.S., Dubchak I., Amaya E., Detter J.C., Fletcher R., Gerhard D.S. , Goodstein D., Graves T., Grigoriev I.V., Grimwood J., Kawashima T., Lindquist E., Lucas S.M., Mead P.E., Mitros T., Ogino H., Ohta Y., Poliakov A.V., Pollet N., Robert J., Salamov A., Sater A.K., Schmutz J., Terry A., Vize P.D., Warren W.C., Wells D., Wills A., Wilson R.K., Zimmerman L.B., Zorn A.M., Grainger R., Grammer T., Khokha M.K., Richardson P.M., Rokhsar D.S. Science 328:633-636(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]	Ensembl Submitted (JUN-2011) to UniProtKB Cited for: IDENTIFICATION.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AAMC01024474 Genomic DNA. No translation available. AAMC01024475 Genomic DNA. No translation available. AAMC01024476 Genomic DNA. No translation available. BC080935 mRNA. Translation: AAH80935.1.
RefSeq	NP_001008204.1. NM_001008203.1.
UniGene	Str.11244.
3D structure databases
SMR	Q642T6. Positions 34-240.
ModBase	Search...
Protein-protein interaction databases
STRING	8364.ENSXETP00000024375.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSXETT00000024375; ENSXETP00000024375; ENSXETG00000011147.
GeneID	493566.
KEGG	xtr:493566.
Organism-specific databases
CTD	7180.
Xenbase	XB-GENE-951048. crisp2.
Phylogenomic databases
eggNOG	NOG312931.
GeneTree	ENSGT00700000104242.
HOGENOM	HOG000236338.
HOVERGEN	HBG004184.
InParanoid	Q642T6.
OrthoDB	EOG4XKV7K.
Family and domain databases
Gene3D	3.40.33.10. 1 hit.
InterPro	IPR001283. Allrgn_V5/Tpx1. IPR018244. Allrgn_V5/Tpx1_CS. IPR014044. CAP_domain. IPR013871. Cysteine_rich_secretory. IPR002413. V5_allergen. [Graphical view]
PANTHER	PTHR10334. PTHR10334. 1 hit.
Pfam	PF00188. CAP. 1 hit. PF08562. Crisp. 1 hit. [Graphical view]
PRINTS	PR00838. V5ALLERGEN. PR00837. V5TPXLIKE.
SMART	SM00198. SCP. 1 hit. [Graphical view]
SUPFAM	SSF55797. SCP-like_extracellular. 1 hit.
PROSITE	PS01009. CRISP_1. 1 hit. PS01010. CRISP_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q642T6_XENTR

Accession

Primary (citable) accession number: Q642T6

Entry history

Integrated into UniProtKB/TrEMBL:	October 25, 2004
Last sequence update:	October 25, 2004
Last modified:	May 29, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)