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Q642I9 (Q642I9_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Cytochrome c oxidase subunit 6A, mitochondrial RuleBase RU004397
Alternative name(s):
Cytochrome c oxidase polypeptide VIa RuleBase RU004397
Gene names
Name:cox6a1 EMBL AAH81530.1 ZFIN ZDB-GENE-030131-7715
OrganismDanio rerio (Zebrafish) (Brachydanio rerio) EMBL AAH81530.1
Taxonomic identifier7955 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length108 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Mitochondrion inner membrane By similarity RuleBase RU004397.

Sequence similarities

Belongs to the cytochrome c oxidase subunit 6A family. RuleBase RU004396

Sequences

Sequence LengthMass (Da)Tools
Q642I9 [UniParc].

Last modified October 25, 2004. Version 1.
Checksum: FB1A92902A1ADC86

FASTA10812,212
        10         20         30         40         50         60 
MAAVGRLSQK LFKSAALTQS RQLSAAAHGE NAAKTWKILT FVVALPGVAV CMLNMYLRSQ 

        70         80         90        100 
HHHEQPEFVP YSHLRIRSKR FPWGDGNKTL FHNPHVNALP DGYEHHDE

« Hide

References

[1]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Brain EMBL AAH81530.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC081530 mRNA. Translation: AAH81530.1.
IPIIPI00773169.
RefSeqNP_001005592.1. NM_001005592.1.
UniGeneDr.7906.

3D structure databases

ProteinModelPortalQ642I9.
SMRQ642I9. Positions 28-104.
ModBaseSearch...

Proteomic databases

PRIDEQ642I9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID335774.
KEGGdre:335774.

Organism-specific databases

CTD1337.
ZFINZDB-GENE-030131-7715. cox6a1.

Phylogenomic databases

HOVERGENHBG060482.
InParanoidQ642I9.
KOK02266.

Gene expression databases

ArrayExpressQ642I9.
BgeeQ642I9.

Family and domain databases

Gene3D4.10.95.10. 1 hit.
InterProIPR001349. Cyt_c_oxidase_su6a.
IPR018507. Cyt_c_oxidase_su6a_CS.
[Graphical view]
PANTHERPTHR11504. PTHR11504. 1 hit.
PfamPF02046. COX6A. 1 hit.
[Graphical view]
PIRSFPIRSF000277. COX6A1. 1 hit.
ProDomPD006036. Cyt_c_oxidase_su6a. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF81411. COX6A. 1 hit.
PROSITEPS01329. COX6A. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20811022.

Entry information

Entry nameQ642I9_DANRE
AccessionPrimary (citable) accession number: Q642I9
Entry history
Integrated into UniProtKB/TrEMBL: October 25, 2004
Last sequence update: October 25, 2004
Last modified: May 29, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info