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Protein

39S ribosomal protein L9, mitochondrial

Gene

Mrpl9

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-RNO-5389840. Mitochondrial translation elongation.
R-RNO-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L9, mitochondrial
Short name:
L9mt
Short name:
MRP-L9
Gene namesi
Name:Mrpl9
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 2

Organism-specific databases

RGDi1359171. mrpl9.

Subcellular locationi

  • Mitochondrion By similarity

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 49MitochondrionBy similarityAdd BLAST49
ChainiPRO_000032211850 – 26239S ribosomal protein L9, mitochondrialAdd BLAST213

Proteomic databases

PaxDbiQ641X9.
PRIDEiQ641X9.

PTM databases

PhosphoSitePlusiQ641X9.

Expressioni

Gene expression databases

BgeeiENSRNOG00000020869.
GenevisibleiQ641X9. RN.

Interactioni

Subunit structurei

Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins.By similarity

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000028316.

Structurei

3D structure databases

ProteinModelPortaliQ641X9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L9P family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG4607. Eukaryota.
ENOG4111HFB. LUCA.
GeneTreeiENSGT00390000008281.
HOGENOMiHOG000247066.
HOVERGENiHBG002704.
InParanoidiQ641X9.
KOiK02939.
OMAiEDTKHGP.
OrthoDBiEOG091G0F05.
PhylomeDBiQ641X9.
TreeFamiTF300170.

Family and domain databases

Gene3Di3.40.5.10. 1 hit.
InterProiIPR000244. Ribosomal_L9.
IPR009027. Ribosomal_L9/RNase_H1_N.
IPR020070. Ribosomal_L9_N.
[Graphical view]
PANTHERiPTHR21368. PTHR21368. 1 hit.
PfamiPF01281. Ribosomal_L9_N. 1 hit.
[Graphical view]
SUPFAMiSSF55658. SSF55658. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q641X9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAASMAPRCS SLLWAGAAWL RQRGIGELLQ PRIERSTPGR DFSLSHYQST
60 70 80 90 100
VIVERWWKVP LAGEGRKPRL HRRHRVYKLV EDTKHRPKDH LELILTQSVD
110 120 130 140 150
EIGVRGDLVS VKKSVGRNKL LPQGLAVYAS PENRKLFEEE KLLRQEGKLE
160 170 180 190 200
KIQTKAGEAT VKFLRSCRLE VGMKNNVKWE LNPEIVARHF FKNLGVVVAP
210 220 230 240 250
HALRLPEDPI TRWGEYWCDV TVNGLDTVRV PMSVVLFRKP KTKRYKHWLA
260
QQAAKITSPE AV
Length:262
Mass (Da):30,076
Last modified:October 25, 2004 - v1
Checksum:i1AEE10A4F48ED93B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC082085 mRNA. Translation: AAH82085.1.
RefSeqiNP_001007697.1. NM_001007696.1.
UniGeneiRn.763.

Genome annotation databases

EnsembliENSRNOT00000028316; ENSRNOP00000028316; ENSRNOG00000020869.
GeneIDi310653.
KEGGirno:310653.
UCSCiRGD:1359171. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC082085 mRNA. Translation: AAH82085.1.
RefSeqiNP_001007697.1. NM_001007696.1.
UniGeneiRn.763.

3D structure databases

ProteinModelPortaliQ641X9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000028316.

PTM databases

PhosphoSitePlusiQ641X9.

Proteomic databases

PaxDbiQ641X9.
PRIDEiQ641X9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000028316; ENSRNOP00000028316; ENSRNOG00000020869.
GeneIDi310653.
KEGGirno:310653.
UCSCiRGD:1359171. rat.

Organism-specific databases

CTDi65005.
RGDi1359171. mrpl9.

Phylogenomic databases

eggNOGiKOG4607. Eukaryota.
ENOG4111HFB. LUCA.
GeneTreeiENSGT00390000008281.
HOGENOMiHOG000247066.
HOVERGENiHBG002704.
InParanoidiQ641X9.
KOiK02939.
OMAiEDTKHGP.
OrthoDBiEOG091G0F05.
PhylomeDBiQ641X9.
TreeFamiTF300170.

Enzyme and pathway databases

ReactomeiR-RNO-5389840. Mitochondrial translation elongation.
R-RNO-5419276. Mitochondrial translation termination.

Miscellaneous databases

PROiQ641X9.

Gene expression databases

BgeeiENSRNOG00000020869.
GenevisibleiQ641X9. RN.

Family and domain databases

Gene3Di3.40.5.10. 1 hit.
InterProiIPR000244. Ribosomal_L9.
IPR009027. Ribosomal_L9/RNase_H1_N.
IPR020070. Ribosomal_L9_N.
[Graphical view]
PANTHERiPTHR21368. PTHR21368. 1 hit.
PfamiPF01281. Ribosomal_L9_N. 1 hit.
[Graphical view]
SUPFAMiSSF55658. SSF55658. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRM09_RAT
AccessioniPrimary (citable) accession number: Q641X9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: October 25, 2004
Last modified: November 30, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.