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Protein

Dynein light chain 1, axonemal

Gene

dnal1

Organism
Xenopus laevis (African clawed frog)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Dynein light chain 1, axonemal
Gene namesi
Name:dnal1
OrganismiXenopus laevis (African clawed frog)
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-983797. dnal1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 192192Dynein light chain 1, axonemalPRO_0000281133Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ641R9.
SMRiQ641R9. Positions 1-189.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati49 – 7022LRR 1Add
BLAST
Repeati71 – 9222LRR 2Add
BLAST
Repeati94 – 11522LRR 3Add
BLAST
Repeati116 – 13722LRR 4Add
BLAST
Domaini150 – 19243LRRCTAdd
BLAST

Sequence similaritiesi

Belongs to the dynein light chain LC1-type family.Curated
Contains 4 LRR (leucine-rich) repeats.Curated
Contains 1 LRRCT domain.Curated

Keywords - Domaini

Leucine-rich repeat, Repeat

Phylogenomic databases

HOVERGENiHBG081457.
KOiK10411.

Family and domain databases

Gene3Di3.80.10.10. 1 hit.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 1 hit.
PROSITEiPS51450. LRR. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q641R9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKATTIKEA LAKWEERTGQ KAGEAKEVKL YAQIPPLEKM DASLSTLVNC
60 70 80 90 100
EKLSLSTNCI EKIANLNGLK YLKILSLGRN NIKNLNGLEA VGETLEELWI
110 120 130 140 150
SYNLIEKLKG IHVMKKLKVL YMSNNLVKDW AEFSKLGELP LLGDIVFVGN
160 170 180 190
PLEEKHTAEG NWMEEAVKRL PKLKKLDGNP VIKQEEEEGD ES
Length:192
Mass (Da):21,562
Last modified:October 25, 2004 - v1
Checksum:i29A37B357B2F1513
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC082218 mRNA. Translation: AAH82218.1.
RefSeqiNP_001087953.1. NM_001094484.1.
UniGeneiXl.49781.

Genome annotation databases

GeneIDi494635.
KEGGixla:494635.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC082218 mRNA. Translation: AAH82218.1.
RefSeqiNP_001087953.1. NM_001094484.1.
UniGeneiXl.49781.

3D structure databases

ProteinModelPortaliQ641R9.
SMRiQ641R9. Positions 1-189.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi494635.
KEGGixla:494635.

Organism-specific databases

CTDi83544.
XenbaseiXB-GENE-983797. dnal1.

Phylogenomic databases

HOVERGENiHBG081457.
KOiK10411.

Family and domain databases

Gene3Di3.80.10.10. 1 hit.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 1 hit.
PROSITEiPS51450. LRR. 4 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. NIH - Xenopus Gene Collection (XGC) project
    Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis.

Entry informationi

Entry nameiDNAL1_XENLA
AccessioniPrimary (citable) accession number: Q641R9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 20, 2007
Last sequence update: October 25, 2004
Last modified: January 20, 2016
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.