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Q64165

- Q64165_RAT

UniProt

Q64165 - Q64165_RAT

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Protein
Submitted name: Enzymatic glycosylation-regulating gene protein
Gene
Gcnt1, rCG_47510
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity Source: RGD

GO - Biological processi

  1. cell adhesion molecule production Source: Ensembl
  2. glycoprotein biosynthetic process Source: Ensembl
  3. kidney morphogenesis Source: Ensembl
  4. leukocyte tethering or rolling Source: Ensembl
  5. response to insulin Source: RGD
  6. tissue morphogenesis Source: Ensembl
Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_196259. O-linked glycosylation of mucins.

Protein family/group databases

CAZyiGT14. Glycosyltransferase Family 14.

Names & Taxonomyi

Protein namesi
Submitted name:
Enzymatic glycosylation-regulating gene proteinImported
Submitted name:
Protein Gcnt1Imported
Submitted name:
RCG47510Imported
Gene namesi
Name:Gcnt1Imported
ORF Names:rCG_47510Imported
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 1

Organism-specific databases

RGDi621370. Gcnt1.

Subcellular locationi

GO - Cellular componenti

  1. Golgi cisterna Source: Ensembl
  2. extracellular space Source: RGD
  3. membrane Source: InterPro
  4. trans-Golgi network Source: Ensembl
Complete GO annotation...

Expressioni

Gene expression databases

GenevestigatoriQ64165.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000020736.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG253565.
GeneTreeiENSGT00750000117608.
HOGENOMiHOG000293251.
HOVERGENiHBG051711.
InParanoidiQ64165.
KOiK00727.
OMAiGIHVRSV.
OrthoDBiEOG74N5HW.
TreeFamiTF315534.

Family and domain databases

InterProiIPR003406. Glyco_trans_14.
[Graphical view]
PfamiPF02485. Branch. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q64165-1 [UniParc]FASTAAdd to Basket

« Hide

MLRNLFRRRL FSYPTKYYFM VLVLSLITFS VVRIHQKPEF VSVSHLELSG    50
DDPNSNVNCT KVLQGDPEEI QKVKLEILTV QFKKRPRRTP HDYINMTRDC 100
ASFIRTRKYI MEPLTKEEVG FPIAYSIVVH HKIDMLDRLL RAIYMPQNFY 150
CIHVDRKAEE SFLAAVQGIA SCFDNVFVAS QLESVVYASW SRVKADLNCM 200
KDLYRMNANW KYLINLCGMD FPIKTNLEIV RKLKSFTGEN SLETEKMPPN 250
KEERWKKRYT VVDGKLTNTG VVKAQPPLKT PLFSGSAYFV VTREYVGYVL 300
ENKNIQKFME WAQDTYSPDE FLWATIQRIP EVPGSLPSSH KYDLSDMNAV 350
ARFVKWQYFE GDVSNGAPYP PCSGVHVRSV CVFGVGDLSW MLRKHHFFAN 400
KFDMDVDPFA LQCLEEHLRH KALETLER 428
Length:428
Mass (Da):49,827
Last modified:November 1, 1996 - v1
Checksum:iAE25A18172897AA8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06010123 Genomic DNA. No translation available.
S79797 mRNA. Translation: AAB35697.2.
CH473953 Genomic DNA. Translation: EDM12976.1.
RefSeqiNP_071612.1. NM_022276.1.
XP_006231209.1. XM_006231147.1.
XP_006231210.1. XM_006231148.1.
XP_006231211.1. XM_006231149.1.
XP_006231212.1. XM_006231150.1.
XP_006231213.1. XM_006231151.1.
UniGeneiRn.162516.

Genome annotation databases

EnsembliENSRNOT00000074939; ENSRNOP00000066013; ENSRNOG00000050534.
GeneIDi64043.
KEGGirno:64043.
UCSCiRGD:621370. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06010123 Genomic DNA. No translation available.
S79797 mRNA. Translation: AAB35697.2 .
CH473953 Genomic DNA. Translation: EDM12976.1 .
RefSeqi NP_071612.1. NM_022276.1.
XP_006231209.1. XM_006231147.1.
XP_006231210.1. XM_006231148.1.
XP_006231211.1. XM_006231149.1.
XP_006231212.1. XM_006231150.1.
XP_006231213.1. XM_006231151.1.
UniGenei Rn.162516.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10116.ENSRNOP00000020736.

Protein family/group databases

CAZyi GT14. Glycosyltransferase Family 14.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000074939 ; ENSRNOP00000066013 ; ENSRNOG00000050534 .
GeneIDi 64043.
KEGGi rno:64043.
UCSCi RGD:621370. rat.

Organism-specific databases

CTDi 2650.
RGDi 621370. Gcnt1.

Phylogenomic databases

eggNOGi NOG253565.
GeneTreei ENSGT00750000117608.
HOGENOMi HOG000293251.
HOVERGENi HBG051711.
InParanoidi Q64165.
KOi K00727.
OMAi GIHVRSV.
OrthoDBi EOG74N5HW.
TreeFami TF315534.

Enzyme and pathway databases

Reactomei REACT_196259. O-linked glycosylation of mucins.

Miscellaneous databases

NextBioi 612697.
PROi Q64165.

Gene expression databases

Genevestigatori Q64165.

Family and domain databases

InterProi IPR003406. Glyco_trans_14.
[Graphical view ]
Pfami PF02485. Branch. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Identification and characterization of a gene regulating enzymatic glycosylation which is induced by diabetes and hyperglycemia specifically in rat cardiac tissue."
    Nishio Y., Warren C.E., Buczek-Thomas J.A., Rulfs J., Koya D., Aiello L.P., Feener E.P., Miller T.B. Jr, Dennis J.W., King G.L.
    J. Clin. Invest. 96:1759-1767(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Sprague-DawleyImported.
    Tissue: HeartImported.
  2. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  5. Ensembl
    Submitted (FEB-2013) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiQ64165_RAT
AccessioniPrimary (citable) accession number: Q64165
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 3, 2014
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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