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Protein
Submitted name:

Antigen LEC-A

Gene

gag

Organism
Mus sp.
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Antigen LEC-AImported
Gene namesi
Name:gagImported
OrganismiMus sp.Imported
Taxonomic identifieri10095 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMus

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei42 – 6322HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ64033.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini492 – 50615CCHC-typeInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis, Zinc-fingerUniRule annotation

Phylogenomic databases

HOVERGENiHBG060203.

Family and domain databases

Gene3Di1.10.1200.30. 1 hit.
1.10.375.10. 1 hit.
4.10.60.10. 1 hit.
InterProiIPR000721. Gag_p24.
IPR008916. Retrov_capsid_C.
IPR008919. Retrov_capsid_N.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF00607. Gag_p24. 1 hit.
PF00098. zf-CCHC. 1 hit.
[Graphical view]
SMARTiSM00343. ZnF_C2HC. 2 hits.
[Graphical view]
SUPFAMiSSF47353. SSF47353. 1 hit.
SSF47943. SSF47943. 1 hit.
SSF57756. SSF57756. 1 hit.
PROSITEiPS50158. ZF_CCHC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q64033-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNSELFSWGT RVPVSTALRG KSDLELSNEI QDSLSEVKWN MFGLEIFLVL
60 70 80 90 100
GALLFLFTCY QVVKIGRILD EIQDKLSEVK RRERVGTRRK GKYTGLSKGL
110 120 130 140 150
EPEEKLRLGR NTWREIRRKR GKREKKKDRL VEVSRRYSSL DELRKPALSS
160 170 180 190 200
SEADEEFSSE ETDWEEEAAH YQPANWSRKK PKAAGEGQFA DWPQGNRLPG
210 220 230 240 250
ALPPYAESPP CVVRQPVVRQ QCAERQCAER QCADSFIPRE EQRKIQQAFP
260 270 280 290 300
VFEGAEGGRV HAPVEYLQIK EIAESVRKYG TNANFTLVQL DRLAGMALTP
310 320 330 340 350
ADWQTVVKAA LPSMGKYMEW RALWHEAAQA QARANAAALT PEQRDWTFDL
360 370 380 390 400
LTGQGAYSAD QTNYHWGAYA QISSTAIRAW KALSRAGETT GQLTKIIQGP
410 420 430 440 450
QESFSDFVAR MTEAAERIFG ESEQAAPLIE QLIYEQATKE CRAAIAPRKN
460 470 480 490 500
KGLQDWLRVC RELGGPLTNA GLAAAILQSQ NRSMSRNDQR TCFNCGKPGH
510 520 530 540 550
FKKDCRAPDK QGGTLTLCSK CGKGYHRADQ CRSVRDIKGR VLPPPDSQSA
560 570 580 590
YVPKNGSSGP RSQGPQRYGN RFVRTQEAVR EATQEDPQGW TCVPPPTSY
Length:599
Mass (Da):67,365
Last modified:November 1, 1996 - v1
Checksum:i1EEE09B2F0B94CD6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
S74315 mRNA. Translation: AAB31958.1.
PIRiI53395.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
S74315 mRNA. Translation: AAB31958.1.
PIRiI53395.

3D structure databases

ProteinModelPortaliQ64033.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOVERGENiHBG060203.

Family and domain databases

Gene3Di1.10.1200.30. 1 hit.
1.10.375.10. 1 hit.
4.10.60.10. 1 hit.
InterProiIPR000721. Gag_p24.
IPR008916. Retrov_capsid_C.
IPR008919. Retrov_capsid_N.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF00607. Gag_p24. 1 hit.
PF00098. zf-CCHC. 1 hit.
[Graphical view]
SMARTiSM00343. ZnF_C2HC. 2 hits.
[Graphical view]
SUPFAMiSSF47353. SSF47353. 1 hit.
SSF47943. SSF47943. 1 hit.
SSF57756. SSF57756. 1 hit.
PROSITEiPS50158. ZF_CCHC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "An intracisternal A-particle sequence codes for an antigen recognized by syngeneic cytolytic T lymphocytes on a mouse spontaneous leukemia."
    de Bergeyck V., De Plaen E., Chomez P., Boon T., Van Pel A.
    Eur. J. Immunol. 24:2203-2212(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ64033_9MURI
AccessioniPrimary (citable) accession number: Q64033
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: December 9, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.