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Protein

Selenide, water dikinase

Gene

selD

Organism
Burkholderia pseudomallei (strain K96243)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Synthesizes selenophosphate from selenide and ATP.UniRule annotation

Catalytic activityi

ATP + selenide + H2O = AMP + selenophosphate + phosphate.UniRule annotation

Cofactori

Mg2+UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei23 – 231UniRule annotation
Sitei26 – 261Important for catalytic activityUniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi236 – 2427ATPUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Kinase, Transferase

Keywords - Ligandi

ATP-binding, Magnesium, Nucleotide-binding, Selenium

Enzyme and pathway databases

BioCyciBPSE272560:GJNI-3822-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Selenide, water dikinaseUniRule annotation (EC:2.7.9.3UniRule annotation)
Alternative name(s):
Selenium donor proteinUniRule annotation
Selenophosphate synthaseUniRule annotation
Gene namesi
Name:selDUniRule annotation
Ordered Locus Names:BPSS0287
OrganismiBurkholderia pseudomallei (strain K96243)
Taxonomic identifieri272560 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiapseudomallei group
Proteomesi
  • UP000000605 Componenti: Chromosome 2

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 354354Selenide, water dikinasePRO_0000127617Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi272560.BPSS0287.

Structurei

3D structure databases

ProteinModelPortaliQ63NL2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the selenophosphate synthase 1 family. Class I subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105D4F. Bacteria.
COG0709. LUCA.
HOGENOMiHOG000219300.
KOiK01008.
OMAiCTLNKPG.

Family and domain databases

Gene3Di3.30.1330.10. 1 hit.
3.90.650.10. 1 hit.
HAMAPiMF_00625. SelD. 1 hit.
InterProiIPR010918. AIR_synth_C_dom.
IPR016188. PurM-like_N.
IPR023061. SelD_I.
IPR004536. SPS/SelD.
[Graphical view]
PfamiPF00586. AIRS. 1 hit.
PF02769. AIRS_C. 1 hit.
[Graphical view]
PIRSFiPIRSF036407. Selenphspht_syn. 1 hit.
SUPFAMiSSF56042. SSF56042. 1 hit.
TIGRFAMsiTIGR00476. selD. 1 hit.

Sequencei

Sequence statusi: Complete.

Q63NL2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTETKQTDAA APRLTSLSHG GGCGCKIAPG VLSELLRRTA PPALFPDLLV
60 70 80 90 100
GTETSDDAAV YRLNDEQAIV ATTDFFMPIV DDPFDFGRIA ATNALSDVYA
110 120 130 140 150
MGGKPILALA LVGMPINVLP HETIAAVLRG GEAVCADAGI PVAGGHSIDS
160 170 180 190 200
VEPIYGLAAL GVVHPARVKR NAAARAGDVL VLGKPLGVGV LSAALKKDRL
210 220 230 240 250
DAQGYAQMIA TTTKLNRPGT ALAALPGVHA LTDVTGFGLL GHTLELARGA
260 270 280 290 300
GLTARVRYGA LPWLAGVEAL VADGVLTGAS GRNWAAYGHD VRLGDGLPAV
310 320 330 340 350
AQALLTDPQT SGGLLVACAP EAVDDVLACF RDDGFERAAA IGEMVDGAAR

VDVS
Length:354
Mass (Da):36,078
Last modified:October 25, 2004 - v1
Checksum:iB85714CD88F67B8F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX571966 Genomic DNA. Translation: CAH37735.1.
RefSeqiWP_004551284.1. NZ_CP009537.1.
YP_110307.1. NC_006351.1.

Genome annotation databases

EnsemblBacteriaiCAH37735; CAH37735; BPSS0287.
GeneIDi3095787.
KEGGibps:BPSS0287.
PATRICi19268174. VBIBurPse99623_4264.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX571966 Genomic DNA. Translation: CAH37735.1.
RefSeqiWP_004551284.1. NZ_CP009537.1.
YP_110307.1. NC_006351.1.

3D structure databases

ProteinModelPortaliQ63NL2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272560.BPSS0287.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAH37735; CAH37735; BPSS0287.
GeneIDi3095787.
KEGGibps:BPSS0287.
PATRICi19268174. VBIBurPse99623_4264.

Phylogenomic databases

eggNOGiENOG4105D4F. Bacteria.
COG0709. LUCA.
HOGENOMiHOG000219300.
KOiK01008.
OMAiCTLNKPG.

Enzyme and pathway databases

BioCyciBPSE272560:GJNI-3822-MONOMER.

Family and domain databases

Gene3Di3.30.1330.10. 1 hit.
3.90.650.10. 1 hit.
HAMAPiMF_00625. SelD. 1 hit.
InterProiIPR010918. AIR_synth_C_dom.
IPR016188. PurM-like_N.
IPR023061. SelD_I.
IPR004536. SPS/SelD.
[Graphical view]
PfamiPF00586. AIRS. 1 hit.
PF02769. AIRS_C. 1 hit.
[Graphical view]
PIRSFiPIRSF036407. Selenphspht_syn. 1 hit.
SUPFAMiSSF56042. SSF56042. 1 hit.
TIGRFAMsiTIGR00476. selD. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiSELD_BURPS
AccessioniPrimary (citable) accession number: Q63NL2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 4, 2005
Last sequence update: October 25, 2004
Last modified: September 7, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.