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Q63I59

- Q63I59_BURPS

UniProt

Q63I59 - Q63I59_BURPS

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Protein
Submitted name:

Putative ATP-dependent DNA ligase

Gene
BPSS2211
Organism
Burkholderia pseudomallei (strain K96243)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBPSE272560:GJNI-5795-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:BPSS2211Imported
OrganismiBurkholderia pseudomallei (strain K96243)Imported
Taxonomic identifieri272560 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiapseudomallei group
ProteomesiUP000000605: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi272560.BPSS2211.

Structurei

3D structure databases

ProteinModelPortaliQ63I59.
SMRiQ63I59. Positions 868-1156.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiSACDMAL.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 2 hits.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q63I59-1 [UniParc]FASTAAdd to Basket

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MAGKLSVYRS RRRFGETPEP EGARRSPRRT KGAGRAGDES KRRARGDAAA     50
SSRGERGRSA LHYVIQEHHA RRLHYDFRLE LDGTLKSWAI PKGPSLDPSV 100
KRLAVHVEDH PLEYAAFEGE IPEGHYGAGS VIIWDRGAWT PAGGVAAARA 150
GYRAGKLSFM LDGDKLHGGW ALVRSRGLRD SGGKHEQWLL IKERDGDARD 200
QADYDVLRAR PGSVLGGARS ARARRGRAAE PTERDAAAPK RARASVPKGR 250
AEAKTSGRAP RTVSNGTAGA GKGASKRASK RASKREGTNT GNGARSGKGN 300
GNGKGAGKGV ATPRRKRAAA PQSSDVDSAD TDSPAARGLA LPAGLAARFG 350
LSGAKRAALP RTLRPQLATL VDAPPPGKDW LYEAKFDGYR VLIRIDRGAA 400
SRPIAVYTRE GLDWSAKFAA QLDALARLPV DRGWLDGEAV VLDRAGVPDF 450
QALQNALGAG RSNDVTLFLF DVPFLNGFDL RGVPLERRRA LLAALVAAHA 500
SDVLRYSESL AFEAADLLTG ACDAGLEGLI GKRRDGRYVE GRSRSWIKLK 550
CRRRQEFVIG GYTEPAGRRS GFGALLLGVY ARAPGDEGDE GERRTRGAAE 600
TRDERRRASH ASRTSRTSRT SRTSRTSRAP DAGAARAPQA RPLALRYVGR 650
VGTGFGERTL RALARTLREH ETGRMPFADV PRERSGTPVH WVKPVLVAEC 700
EFAEWTGDGI VRQASFVGLR EDKPARTIVR EQPQSMETEA MNEHADEHTD 750
EHTDARAERR TGGRTRRKAR DGGARDAPPL ARHPKRGDAG SSARKGARDG 800
EAGKRAAAGS SPSSSPSSST STSISASGRT RGGGRSASRD RAGDADEGAN 850
EDANDHAPRE RAGAPKVAGV RVSHPGRVID PHTGTRKLDL VEYWEWIAPW 900
LLPHLKGRPV SLVRAPADIG GELFFQKHAD KLEIPNVALH PGLDPGHEAL 950
ITIDDVKGLV GAAQMGTIEL HTWNAHVSNI EKPDRAVFDL DPDPSLDWRA 1000
VIEAAQLTRA LLDELGLVSF CKTSGGKGLH VVVPLARHAG WDDVKAFAHA 1050
VARHMAATLP ERFTATMGPR NRKGKIFVDY LRNNRGASTI AAYSVRARPG 1100
LGVSVPIAWD ELPDTTGAAQ WTLANLHERL DALKHDPWRA YAHVRQRVTA 1150
ALRKRLSDG 1159
Length:1,159
Mass (Da):125,063
Last modified:October 25, 2004 - v1
Checksum:i37E29FD49F143058
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX571966 Genomic DNA. Translation: CAH39696.1.
RefSeqiYP_112213.1. NC_006351.1.

Genome annotation databases

EnsemblBacteriaiCAH39696; CAH39696; BPSS2211.
GeneIDi3096301.
KEGGibps:BPSS2211.
PATRICi19272930. VBIBurPse99623_6635.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX571966 Genomic DNA. Translation: CAH39696.1 .
RefSeqi YP_112213.1. NC_006351.1.

3D structure databases

ProteinModelPortali Q63I59.
SMRi Q63I59. Positions 868-1156.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 272560.BPSS2211.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAH39696 ; CAH39696 ; BPSS2211 .
GeneIDi 3096301.
KEGGi bps:BPSS2211.
PATRICi 19272930. VBIBurPse99623_6635.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OMAi SACDMAL.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci BPSE272560:GJNI-5795-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 2 hits.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K96243Imported.

Entry informationi

Entry nameiQ63I59_BURPS
AccessioniPrimary (citable) accession number: Q63I59
Entry historyi
Integrated into UniProtKB/TrEMBL: October 25, 2004
Last sequence update: October 25, 2004
Last modified: May 14, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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