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Protein

39S ribosomal protein L23, mitochondrial

Gene

Mrpl23

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-RNO-5389840. Mitochondrial translation elongation.
R-RNO-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L23, mitochondrial
Short name:
L23mt
Short name:
MRP-L23
Alternative name(s):
L23 mitochondrial-related protein
Gene namesi
Name:Mrpl23
Synonyms:L23mrp
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi68343. Mrpl23.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 14614639S ribosomal protein L23, mitochondrialPRO_0000129486Add
BLAST

Proteomic databases

PaxDbiQ63750.
PRIDEiQ63750.

Expressioni

Gene expression databases

BgeeiENSRNOG00000020354.
GenevisibleiQ63750. RN.

Interactioni

Protein-protein interaction databases

IntActiQ63750. 1 interaction.
STRINGi10116.ENSRNOP00000027585.

Structurei

3D structure databases

ProteinModelPortaliQ63750.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L23P family.Curated

Phylogenomic databases

eggNOGiKOG4089. Eukaryota.
ENOG4111IAB. LUCA.
GeneTreeiENSGT00390000007739.
HOGENOMiHOG000231896.
HOVERGENiHBG052914.
InParanoidiQ63750.
KOiK02892.
OMAiEMTKYDV.
OrthoDBiEOG091G16EY.
PhylomeDBiQ63750.
TreeFamiTF105852.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR012678. Ribosomal_L23/L15e_core_dom.
IPR013025. Ribosomal_L25/23.
[Graphical view]
PfamiPF00276. Ribosomal_L23. 1 hit.
[Graphical view]
SUPFAMiSSF54189. SSF54189. 1 hit.

Sequencei

Sequence statusi: Complete.

Q63750-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARNVLYPLY QLGGPQLRVF RTNFFIQLVR PGTAQPEDTV QFRIPMEMTR
60 70 80 90 100
VDLRNYLEQI YNVPVAAVRT RVQHGSNRRR DHKNVRIKKP DYKVAYVQLA
110 120 130 140
HGQTFTFPDL FPEKEPTSPD PLEEELPQQR QSSDPRCPGI PSWFGL
Length:146
Mass (Da):17,050
Last modified:November 1, 1996 - v1
Checksum:i1A0C1CEE119D7534
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U62635 mRNA. Translation: AAB05795.1.
RefSeqiNP_071974.1. NM_022529.1.
UniGeneiRn.1608.

Genome annotation databases

EnsembliENSRNOT00000027585; ENSRNOP00000027585; ENSRNOG00000020354.
GeneIDi64360.
KEGGirno:64360.
UCSCiRGD:68343. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U62635 mRNA. Translation: AAB05795.1.
RefSeqiNP_071974.1. NM_022529.1.
UniGeneiRn.1608.

3D structure databases

ProteinModelPortaliQ63750.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ63750. 1 interaction.
STRINGi10116.ENSRNOP00000027585.

Proteomic databases

PaxDbiQ63750.
PRIDEiQ63750.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000027585; ENSRNOP00000027585; ENSRNOG00000020354.
GeneIDi64360.
KEGGirno:64360.
UCSCiRGD:68343. rat.

Organism-specific databases

CTDi6150.
RGDi68343. Mrpl23.

Phylogenomic databases

eggNOGiKOG4089. Eukaryota.
ENOG4111IAB. LUCA.
GeneTreeiENSGT00390000007739.
HOGENOMiHOG000231896.
HOVERGENiHBG052914.
InParanoidiQ63750.
KOiK02892.
OMAiEMTKYDV.
OrthoDBiEOG091G16EY.
PhylomeDBiQ63750.
TreeFamiTF105852.

Enzyme and pathway databases

ReactomeiR-RNO-5389840. Mitochondrial translation elongation.
R-RNO-5419276. Mitochondrial translation termination.

Miscellaneous databases

PROiQ63750.

Gene expression databases

BgeeiENSRNOG00000020354.
GenevisibleiQ63750. RN.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR012678. Ribosomal_L23/L15e_core_dom.
IPR013025. Ribosomal_L25/23.
[Graphical view]
PfamiPF00276. Ribosomal_L23. 1 hit.
[Graphical view]
SUPFAMiSSF54189. SSF54189. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRM23_RAT
AccessioniPrimary (citable) accession number: Q63750
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 5, 2005
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 94 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.