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Protein
Submitted name:

Odorant-binding protein

Gene

Obp2b

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Odorant-binding proteinImported
Gene namesi
Name:Obp2bImported
Synonyms:Obp2aImported, RY2G12Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi708374. Obp2b.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919Sequence analysisAdd
BLAST
Chaini20 – 176157Sequence analysisPRO_5004266591Add
BLAST

Proteomic databases

PaxDbiQ63613.

Expressioni

Gene expression databases

GenevisibleiQ63613. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000035482.

Structurei

3D structure databases

ProteinModelPortaliQ63613.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini31 – 165135Lipocln_cytosolic_FA-bd_domInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410IZGJ. Eukaryota.
ENOG4111AYP. LUCA.
HOGENOMiHOG000231562.
HOVERGENiHBG101411.
PhylomeDBiQ63613.

Family and domain databases

Gene3Di2.40.128.20. 1 hit.
InterProiIPR012674. Calycin.
IPR011038. Calycin-like.
IPR000566. Lipocln_cytosolic_FA-bd_dom.
IPR002450. von_Ebner_gland.
[Graphical view]
PfamiPF00061. Lipocalin. 1 hit.
[Graphical view]
PRINTSiPR01175. VNEBNERGLAND.
SUPFAMiSSF50814. SSF50814. 1 hit.

Sequencei

Sequence statusi: Complete.

Q63613-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKSRLLTVLL LGLMAVLKAQ EAPPDDQEDF SGKWYTKATV CDRNHTDGKR
60 70 80 90 100
PMKVFPMTVT ALEGGDLEVR ITFRGKGHCH LRRITMHKTD EPGKYTTFKG
110 120 130 140 150
KKTFYTKEIP VKDHYIFYIK GQRHGKSYLK GKLVGRDSKD NPEAMEEFKK
160 170
FVKSKGFREE NITVPELLDE CVPGSD
Length:176
Mass (Da):20,171
Last modified:November 1, 1996 - v1
Checksum:i3328D11B90FD91BF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M76734 mRNA. Translation: AAA42307.1.
PIRiA40464.
RefSeqiNP_775171.1. NM_173148.1.
UniGeneiRn.11371.

Genome annotation databases

GeneIDi286933.
KEGGirno:286933.
UCSCiRGD:708374. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M76734 mRNA. Translation: AAA42307.1.
PIRiA40464.
RefSeqiNP_775171.1. NM_173148.1.
UniGeneiRn.11371.

3D structure databases

ProteinModelPortaliQ63613.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000035482.

Proteomic databases

PaxDbiQ63613.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi286933.
KEGGirno:286933.
UCSCiRGD:708374. rat.

Organism-specific databases

CTDi29989.
RGDi708374. Obp2b.

Phylogenomic databases

eggNOGiENOG410IZGJ. Eukaryota.
ENOG4111AYP. LUCA.
HOGENOMiHOG000231562.
HOVERGENiHBG101411.
PhylomeDBiQ63613.

Gene expression databases

GenevisibleiQ63613. RN.

Family and domain databases

Gene3Di2.40.128.20. 1 hit.
InterProiIPR012674. Calycin.
IPR011038. Calycin-like.
IPR000566. Lipocln_cytosolic_FA-bd_dom.
IPR002450. von_Ebner_gland.
[Graphical view]
PfamiPF00061. Lipocalin. 1 hit.
[Graphical view]
PRINTSiPR01175. VNEBNERGLAND.
SUPFAMiSSF50814. SSF50814. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ63613_RAT
AccessioniPrimary (citable) accession number: Q63613
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: June 8, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.