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Protein
Submitted name:

Alpha-tropomyosin 3

Gene

Tpm1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-tropomyosin 3Imported
Submitted name:
Tropomyosin 1, alpha, isoform CRA_fImported
Submitted name:
Tropomyosin alpha-1 chainImported
Gene namesi
Name:Tpm1Imported
Synonyms:alpha-tropomyosin 3Imported, Tpm1_v1Imported, Tpm1_v3Imported, Tpm1_v4Imported
ORF Names:rCG_56696Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 8

Organism-specific databases

RGDi3898. Tpm1.

Expressioni

Gene expression databases

BgeeiENSRNOG00000018184.

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili1 – 273Sequence analysisAdd BLAST273

Sequence similaritiesi

Belongs to the tropomyosin family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysisSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00550000074494.
HOGENOMiHOG000231522.
HOVERGENiHBG107404.
OMAiKCKIKAI.

Family and domain databases

InterProiView protein in InterPro
IPR000533. Tropomyosin.
PfamiView protein in Pfam
PF00261. Tropomyosin. 1 hit.
PRINTSiPR00194. TROPOMYOSIN.
PROSITEiView protein in PROSITE
PS00326. TROPOMYOSIN. 1 hit.

Sequencei

Sequence statusi: Complete.

Q63607-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDAIKKKMQM LKLDKENALD RAEQAEADKK AAEDRSKQLE DELVSLQKKL
60 70 80 90 100
KGTEDELDKY SEALKDAQEK LELAEKKATD AEADVASLNR RIQLVEEELD
110 120 130 140 150
RAQERLATAL QKLEEAEKAA DESERGMKVI ESRAQKDEEK MEIQEIQLKE
160 170 180 190 200
AKHIAEDADR KYEEVARKLV IIESDLERAE ERAELSEGQV RQLEEQLRIM
210 220 230 240 250
DQTLKALMAA EDKYSQKEDK YEEEIKVLSD KLKEAETRAE FAERSVTKLE
260 270 280
KSIDDLEEKV AHAKEENLSM HQMLDQTLLE LNNM
Length:284
Mass (Da):32,848
Last modified:November 1, 1996 - v1
Checksum:iEA99DFF465F4ACE3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07070506 Genomic DNA. No translation available.
M60667 mRNA. Translation: AAA18097.1.
CH474041 Genomic DNA. Translation: EDL84236.1.
PIRiB39816.
RefSeqiNP_001029240.1. NM_001034068.1.
NP_001029242.1. NM_001034070.1.
NP_001029243.1. NM_001034071.1.
UniGeneiRn.87540.

Genome annotation databases

EnsembliENSRNOT00000057641; ENSRNOP00000054446; ENSRNOG00000018184.
GeneIDi24851.

Similar proteinsi

Entry informationi

Entry nameiQ63607_RAT
AccessioniPrimary (citable) accession number: Q63607
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: November 22, 2017
This is version 114 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported