Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

RCG21090

Gene

Sp4

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
RCG21090Imported
Submitted name:
Sp4 transcription factorImported
Submitted name:
Zinc finger proteinImported
Gene namesi
Name:Sp4Imported
Synonyms:HF-1bImported
ORF Names:rCG_21090Imported
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 6

Organism-specific databases

RGDi3741. Sp4.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000005472.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000007625.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini646 – 675C2H2-typeInterPro annotationAdd BLAST30
Domaini676 – 705C2H2-typeInterPro annotationAdd BLAST30
Domaini706 – 733C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00760000118984.
HOGENOMiHOG000234295.
HOVERGENiHBG008933.
KOiK09194.
OMAiSCPNCRD.
OrthoDBiEOG091G0HX6.
TreeFamiTF350150.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR030453. SP4.
IPR013087. Znf_C2H2_type.
IPR013083. Znf_RING/FYVE/PHD.
PANTHERiPTHR23235:SF32. PTHR23235:SF32. 1 hit.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 3 hits.
SUPFAMiSSF57667. SSF57667. 2 hits.
PROSITEiView protein in PROSITE
PS00028. ZINC_FINGER_C2H2_1. 3 hits.
PS50157. ZINC_FINGER_C2H2_2. 3 hits.

Sequencei

Sequence statusi: Complete.

Q63158-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDQKKEEEE EAAAAMATEG GKTSEPENNN KKPKTSGSQD SQPSPLALLA
60 70 80 90 100
ATCSKIGTPG ENQATGQQQI IIDPSQGLVQ LQNQPQQLEL VTTQLAGNAW
110 120 130 140 150
QLVASTPPAS KENNVSQPAS SSSSSSSSNN GSSSPTKTKS GNPSTPNQFQ
160 170 180 190 200
VIQVQNPSGS VQYQVIPQLQ TVEGQQIQIN PTSSSSLQDL QGQIQLISAG
210 220 230 240 250
NNQAILTAAN RTASGNILAQ NLANQTVPVQ IRPGVSIPLQ LQTLPGTQAQ
260 270 280 290 300
VVTTLPINIG GVTLALPVIN NVTAGGGTGQ VGQPTTTTTD SGTSNGNQLV
310 320 330 340 350
STPTTSTAPA STMPESPSSS TTCTTTASTS LTSSDTLVSS ADTGQYASTS
360 370 380 390 400
ASSSERTIEE PQTPAATESE AQSSSQLQSN GIQNAQDQSN SLQQVQIVGQ
410 420 430 440 450
PILQQIQIQQ PQQQIIQAIP PQSFQLQSGQ TIQTIQQQPL QNVQLQAVNP
460 470 480 490 500
TQVLIRAPTL TPSGQISWQT VQVQNIQSLS NLQVQNAGLS QQLTITPVSS
510 520 530 540 550
SGGTTLAQIA PVAVAGAPIT LNTAQLASVP NLQTVSVANL GAAGVQVQGV
560 570 580 590 600
PVTITSVAGQ QQGQDGVKVQ QATIAPVTVA VGGIANATIG AVSPDQLTQV
610 620 630 640 650
HLQQGQQTSD AEVQPGKRLR RVACSCPNCR EGEGRGSSEP GKKKQHVCHI
660 670 680 690 700
EGCGKVYGKT SHLRAHLRWH TGERPFICNW MFCGKRFTRS DELQRHRRTH
710 720 730 740 750
TGEKRFECPE CSKRFMRSDH LSKHVKTHQN KKGGGTALAI VTSGELDSSV
760 770 780
TEVLGSPRIV TVAAISQDSN PATPNVSTNM EEF
Length:783
Mass (Da):81,984
Last modified:November 1, 1996 - v1
Checksum:i394AA6D4DEA5A197
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07065921 Genomic DNA. No translation available.
U07610 mRNA. Translation: AAA17375.1.
CH474038 Genomic DNA. Translation: EDL89090.1.
PIRiA48143.
RefSeqiNP_036893.1. NM_012761.1.
UniGeneiRn.9989.

Genome annotation databases

EnsembliENSRNOT00000007625; ENSRNOP00000007625; ENSRNOG00000005472.
GeneIDi25162.
KEGGirno:25162.
UCSCiRGD:3741. rat.

Similar proteinsi

Entry informationi

Entry nameiQ63158_RAT
AccessioniPrimary (citable) accession number: Q63158
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: August 30, 2017
This is version 124 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported