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Protein
Submitted name:

Alpha-1 type I collagen

Gene

Col1a1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-1 type I collagenImported
Gene namesi
Name:Col1a1Imported
Synonyms:COLIA1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi61817. Col1a1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Family & Domainsi

Keywords - Domaini

CollagenImported

Sequencei

Sequence statusi: Fragment.

Q63121-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
PIWFPPTQPT FPXTLETDQQ PKLNFPKSQK LGDNFTWTLE NIFFLCIHLS
60 70
NLVFIFDQLN VTKNQKCIQP Y
Length:71
Mass (Da):8,397
Last modified:November 1, 1996 - v1
Checksum:iA96D6221648E45AA
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported
Non-terminal residuei71 – 711Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M27208 mRNA. Translation: AAA64617.1.
PIRiI57652.
UniGeneiRn.2953.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M27208 mRNA. Translation: AAA64617.1.
PIRiI57652.
UniGeneiRn.2953.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

RGDi61817. Col1a1.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "Regulated expression of nuclear protein(s) in myogenic cells that binds to a conserved 3' untranslated region in pro alpha 1 (I) collagen cDNA."
    Herget T., Burba M., Schmoll M., Zimmermann K., Starzinski-Powitz A.
    Mol. Cell. Biol. 9:2828-2836(1989) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: MyotubeImported.

Entry informationi

Entry nameiQ63121_RAT
AccessioniPrimary (citable) accession number: Q63121
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: June 24, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.