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Protein
Submitted name:

CCAAT binding transcription factor-B subunit

Gene

Nfyb

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
CCAAT binding transcription factor-B subunitImported
Gene namesi
Name:NfybImported
Synonyms:CBF-A11Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi3172. Nfyb.

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotation

PTM / Processingi

Proteomic databases

PaxDbiQ63091.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000061405.

Structurei

3D structure databases

ProteinModelPortaliQ63091.
SMRiQ63091. Positions 19-105.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini20 – 8465CBFD_NFYB_HMFInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG0869. Eukaryota.
COG2036. LUCA.
HOVERGENiHBG008864.

Family and domain databases

Gene3Di1.10.20.10. 1 hit.
InterProiIPR003958. CBFA_NFYB_domain.
IPR009072. Histone-fold.
IPR003956. Transcrpt_fac_NFYB/HAP3_CS.
[Graphical view]
PfamiPF00808. CBFD_NFYB_HMF. 1 hit.
[Graphical view]
SUPFAMiSSF47113. SSF47113. 1 hit.
PROSITEiPS00685. NFYB_HAP3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q63091-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNDHEDTNGS KESFREQDIY LPIANVARIM KNAIPQTGKI AKDAKECVQE
60 70 80 90 100
CVSEFISFIT SEASERCHQE KRKTINGEDI LFAMSTLGFD SYVEPLKLYL
110 120 130 140
QKFREAMKGE KGIGGAVSAT DGLSEELTEE AFSKLGTAAG EPSPWAVC
Length:148
Mass (Da):16,302
Last modified:November 1, 1996 - v1
Checksum:i6855E5C857115AD0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M60617 mRNA. Translation: AAA40888.1.
PIRiB23692.
UniGeneiRn.90077.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M60617 mRNA. Translation: AAA40888.1.
PIRiB23692.
UniGeneiRn.90077.

3D structure databases

ProteinModelPortaliQ63091.
SMRiQ63091. Positions 19-105.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000061405.

Proteomic databases

PaxDbiQ63091.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

RGDi3172. Nfyb.

Phylogenomic databases

eggNOGiKOG0869. Eukaryota.
COG2036. LUCA.
HOVERGENiHBG008864.

Family and domain databases

Gene3Di1.10.20.10. 1 hit.
InterProiIPR003958. CBFA_NFYB_domain.
IPR009072. Histone-fold.
IPR003956. Transcrpt_fac_NFYB/HAP3_CS.
[Graphical view]
PfamiPF00808. CBFD_NFYB_HMF. 1 hit.
[Graphical view]
SUPFAMiSSF47113. SSF47113. 1 hit.
PROSITEiPS00685. NFYB_HAP3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ63091_RAT
AccessioniPrimary (citable) accession number: Q63091
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 6, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.